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WormBase Tree Display for Gene: WBGene00099573

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Name Class

WBGene00099573SMapS_parentSequencePPA_ChrV
IdentityVersion3
NameSequence_namePPA10019
Molecular_namePPA10019
PPA10019.1
PP52744
Other_nameGENEPREDICTION_SNAP300000066555
GENEPREDICTION_SNAP300000066556
GENEPREDICTION_SNAP300000066557
UMM-S60-4.15Person_evidenceWBPerson606
Public_namePPA10019
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099574
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099575
Acquires_mergeWBGene00099574
WBGene00099575
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.413343From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
1.24003From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
OrthologWBGene00007565Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00012251Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00012253Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00015050Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00015052Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00020191Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00024580Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029302Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029303Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029304Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029305Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029306Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029307Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029308Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029309Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00029310Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00031718Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00031719Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00031720Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00031721Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00034204Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00035449Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00056559Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00125130Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00142867Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00129455Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00122490Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00133805Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00213371Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00217064Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00123886Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00130017Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00135825Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00121832Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00181987Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00148079Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00158623Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00161062Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00163222Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00190088Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00026382Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00030452Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00031014Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00034248Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00007153Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008891Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019917Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00138451Caenorhabditis japonicaFrom_analysisWormBase-Compara
CBOVI.g636Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4605Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14312Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g14313Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g18408Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14968Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g15776Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g14229Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g18068Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1854Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5850Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5851Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g10476Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g14109Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2934Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2936Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g2937Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP38.g9873Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g21861Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18791Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g4508Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g9518Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00014.g992Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00033.g1916Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00055.g2849Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00225.g7373Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00404.g10380Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00404.g10381Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00637.g13019Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00637.g13022Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00976.g15189Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_00985.g15231Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_06970.g20600Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g15445Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g19626Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g22084Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold461.g1492Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold522.g2862Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold522.g2910Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02980.g28630Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_04473.g33020Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_05106.g34391Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_02820Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017708Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_019864Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00644Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01294Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04334Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09530Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10034Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10755Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50272600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50273000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50273100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50286000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00056557Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00058975Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00084372Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrII_pilon.g3233Caenorhabditis elegansFrom_analysisWormBase-Compara
chrII_pilon.g3240Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g16181Caenorhabditis elegansFrom_analysisWormBase-Compara
chrV_pilon.g17636Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (56)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-41; clec-52; and clec-49.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA10019
Corresponding_transcriptPPA10019.1
Other_sequenceJI468485.1
Experimental_infoMicroarray_resultsGPL14372_Probes_1589
GPL14372_Probes_1591
GPL14372_Probes_1592
GPL14372_Probes_1593
GPL14372_Probes_1595
GPL14372_Probes_38500
GPL14372_Probes_38502
GPL14372_Probes_38509
Expression_clusterWBPaper00041466:PP_germline-ablation_regulated
MethodGene