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WormBase Tree Display for Gene: WBGene00031014

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Name Class

WBGene00031014SMapS_parentSequencecb25.fpc2220a
IdentityVersion2
NameCGC_nameCbr-clec-41From_analysisInferred_from_orthology
Sequence_nameCBG09432
Molecular_nameCBG09432
CBG09432.1
CBP08216
Other_nameCBG_09432Accession_evidenceNDBHE600954
Public_nameCbr-clec-41
DB_infoDatabaseNDBlocus_tagCBG_09432
SpeciesCaenorhabditis briggsae
HistoryVersion_change108 Sep 2004 10:52:00WBPerson1971EventImportedInitial conversion from brigace
220 Sep 2007 17:07:05WBPerson2970Name_changeCGC_nameCbr-clec-41
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
RNASeq_FPKMWBls:0000002114.225From_analysisRNASeq.briggsae.WBls:0000002.control_mean
226.616From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP011366.SRX127749
55.6991From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392718
60.3587From_analysisRNASeq.briggsae.WBls:0000002.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP034522.SRX392717
119.176From_analysisRNASeq.briggsae.WBls:0000002.control_mean
134.03From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000002.Hermaphrodite.WBbt:0007833.SRP006033.SRX053351
97.1944From_analysisRNASeq.briggsae.WBls:0000002.control_median
WBls:00000030.888995From_analysisRNASeq.briggsae.WBls:0000003.control_mean
RNASeq.briggsae.WBls:0000003.control_median
1.77799From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392706
RNASeq.briggsae.WBls:0000003.control_median
0From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392707
1.24685From_analysisRNASeq.briggsae.WBls:0000003.control_mean
1.96257From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000003.Hermaphrodite.WBbt:0007833.SRP034522.SRX392708
WBls:00000045.16033From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089070
5.16236From_analysisRNASeq.briggsae.WBls:0000004.control_mean
RNASeq.briggsae.WBls:0000004.control_median
5.16439From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX089069
5.77122From_analysisRNASeq.briggsae.WBls:0000004.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103655
6.1519From_analysisRNASeq.briggsae.WBls:0000004.control_mean
6.71481From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX100087
7.94877From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000004.Hermaphrodite.WBbt:0007833.SRP006033.SRX103656
WBls:0000024 (12)
WBls:0000027117.495From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX100088
28.0703From_analysisRNASeq.briggsae.WBls:0000027.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX052079
51.272From_analysisRNASeq.briggsae.WBls:0000027.control_mean
8.25062From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP006033.SRX103666
114.073From_analysisRNASeq.briggsae.WBls:0000027.control_mean
302.477From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000027.Hermaphrodite.WBbt:0007833.SRP034522.SRX392712
72.7827From_analysisRNASeq.briggsae.WBls:0000027.control_median
WBls:0000035274.286From_analysisRNASeq.briggsae.WBls:0000035.control_mean
RNASeq.briggsae.WBls:0000035.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000035.Hermaphrodite.WBbt:0007833.SRP034522.SRX392713
WBls:0000038270.035From_analysisRNASeq.briggsae.WBls:0000038.control_median
277.801From_analysisRNASeq.briggsae.WBls:0000038.control_mean
44.4364From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX052081
461.294From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392714
526.697From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP034522.SRX392715
78.7751From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000038.Hermaphrodite.WBbt:0007833.SRP006033.SRX100089
WBls:000004124.6541From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191956
38.0906From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191953
38.1951From_analysisRNASeq.briggsae.WBls:0000041.control_median
38.2997From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191955
38.7728From_analysisRNASeq.briggsae.WBls:0000041.control_mean
54.0468From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Hermaphrodite.WBbt:0007833.SRP016006.SRX191954
19.858From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191957
21.7467From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191958
31.3724From_analysisRNASeq.briggsae.WBls:0000041.control_median
32.7826From_analysisRNASeq.briggsae.WBls:0000041.control_mean
WBls:00000630From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX100086
68.2009From_analysisRNASeq.briggsae.WBls:0000063.control_mean
79.8695From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103668
81.4From_analysisRNASeq.briggsae.WBls:0000063.control_median
RNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX103667
84.9656From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089120
94.7696From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP006033.SRX089119
40.1617From_analysisRNASeq.briggsae.WBStrain00040935.WBls:0000063.Hermaphrodite.WBbt:0007833.SRP034522.SRX392716
63.5277From_analysisRNASeq.briggsae.WBls:0000063.control_mean
80.6348From_analysisRNASeq.briggsae.WBls:0000063.control_median
WBls:0000101100.159From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
60.3587From_analysisRNASeq.briggsae.total_over_all_stages.control_median
49.2416From_analysisRNASeq.briggsae.total_over_all_stages.control_median
90.665From_analysisRNASeq.briggsae.total_over_all_stages.control_mean
Ortholog (80)
Paralog (41)
Structured_descriptionAutomated_descriptionIs affected by Cbr-htz-1 and Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Is an ortholog of C. elegans clec-41. In C. elegans, clec-41 is involved in positive regulation of chemotaxis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG09432
Corresponding_CDS_historyCBG09432:bp194
Corresponding_transcriptCBG09432.1
Other_sequenceCJC05559_1
EY473450.1
ACC27035_1
Acan_isotig18830
Oden_isotig20357
Experimental_infoExpr_patternExpr1065020
Microarray_resultsGPL8303_CB6_WBGene00031014_A
GPL8303_CB6_WBGene00031014_B
GPL14143_CBG09432_1414-1473_0.941_5_B
GPL14143_CBG09432_1427-1486_0.927_16_C
GPL14143_CBG09432_1556-1615_0.943_2_A
Expression_clusterWBPaper00051137:Santeuil-virus_upregulated_JU1264
WBPaper00059178:Cbr-htz-1(gu167)_upregulated
WBPaper00059178:Cbr-spr-4(gu163)_upregulated
MethodGene