WormBase Tree Display for Gene: WBGene00033502

WBGene00033502 SMap: S_parent: Sequence: cb25.fpc2888a2
  Identity: Version: 2
    Name: CGC_name: Cbr-cof-2 From_analysis: Inferred_from_orthology
      Sequence_name: CBG12573
      Molecular_name: CBG12573
        CBG12573.1
        CBP27516
      Other_name: CBG_12573 Accession_evidence: NDB HE600940
      Public_name: Cbr-cof-2
    DB_info: Database: NDB locus_tag CBG_12573
    Species: Caenorhabditis briggsae
    History: Version_change: 1 08 Sep 2004 10:52:03 WBPerson1971 Event: Imported: Initial conversion from brigace
        2 20 Sep 2007 17:07:04 WBPerson2970 Name_change: CGC_name: Cbr-cof-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cof
    RNASeq_FPKM (10)
    Ortholog: WBGene00000583 Caenorhabditis elegans From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00064309 Caenorhabditis remanei From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00095724 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00160276 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00194481 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g9098 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5568 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g5569 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6198 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1570 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17590 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7690 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3685 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13146 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g16364 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g21808 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6146 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00732.g13765 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-cof-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00420.g11103 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_06978 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002716 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01704 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4864 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10322200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      WBGene00223100 Brugia malayi From_analysis: WormBase-Compara
      WBGene00268748 Brugia malayi From_analysis: WormBase-Compara
      chrI_pilon.g1110 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00136809 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00178550 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00248602 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260462 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292551 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00032956 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00038898 Caenorhabditis briggsae From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Olfactomedin-like domain; Collagen triple helix repeat; and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans cof-2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CBG12573
    Corresponding_CDS_history: CBG12573:bp194
    Corresponding_transcript: CBG12573.1
    Other_sequence: JI166496.1
      JI167173.1
      JI468474.1
      Dviv_isotig26478
      Oden_isotig21470
  Experimental_info: Expr_pattern: Expr1058645
    Microarray_results: GPL8303_CB6_WBGene00033502_A
      GPL8303_CB6_WBGene00033502_B
      GPL14143_CBG12573_1203-1262_0.946_7_C
      GPL14143_CBG12573_1286-1345_0.957_1_B
      GPL14143_CBG12573_1402-1461_0.948_6_A
    Expression_cluster: WBPaper00059178:Cbr-spr-4(gu163)_downregulated
  Method: Gene