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WormBase Tree Display for Gene: WBGene00016655

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Name Class

WBGene00016655SMapS_parentSequenceC44E4
IdentityVersion2
NameCGC_nameacbp-1Person_evidenceWBPerson344
Sequence_nameC44E4.6
Molecular_nameC44E4.6
C44E4.6.1
CE08720
C44E4.6.2
Other_nameCELE_C44E4.6Accession_evidenceNDBBX284601
Public_nameacbp-1
DB_infoDatabaseAceViewgene1F204
WormQTLgeneWBGene00016655
WormFluxgeneWBGene00016655
NDBlocus_tagCELE_C44E4.6
PanthergeneCAEEL|WormBase=WBGene00016655|UniProtKB=O01805
familyPTHR23310
NCBIgene172071
RefSeqproteinNM_059011.8
SwissProtUniProtAccO01805
TREEFAMTREEFAM_IDTF315078
UniProt_GCRPUniProtAccO01805
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
201 Apr 2005 11:05:24WBPerson2970Name_changeCGC_nameacbp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classacbp
Allele (28)
StrainWBStrain00033090
RNASeq_FPKM (74)
GO_annotation00025731
00025732
00025733
00025734
00025735
00122228
Contained_in_operonCEOP1196
OrthologWBGene00060455Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00040843Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WBGene00152182Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00138155Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WBGene00058392Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00131355Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00123123Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00161962Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00152584Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00066424Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00224439Brugia malayiFrom_analysisWormBase-Compara
WBGene00229362Brugia malayiFrom_analysisWormBase-Compara
WBGene00234030Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g10155Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g3008Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP31.g12040Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP38.g3350Caenorhabditis quiockensisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8537Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g8551Caenorhabditis tropicalisFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00696Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20523Panagrellus redivivusFrom_analysisWormBase-Compara
chrI_pilon.g741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238981Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245573Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00245847Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00205063Pristionchus pacificusFrom_analysisWormBase-Compara
SGD:S000003269Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
PhylomeDB
SonicParanoid
FB:FBgn0010387Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040426-1861Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
ZFIN:ZDB-GENE-050913-108Danio rerioFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:2690Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
HGNC:17715Homo sapiensFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
MGI:94865Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
MGI:1925495Mus musculusFrom_analysisHieranoid
OMA
OrthoInspector
RGD:2490Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
RGD:1564164Rattus norvegicusFrom_analysisHieranoid
Inparanoid
OMA
OrthoInspector
SonicParanoid
ParalogWBGene00001153Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007680Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009818Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00012457Caenorhabditis elegansFrom_analysisPanther
WBGene00044603Caenorhabditis elegansFrom_analysisPanther
WBGene00018949Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionacbp-1 encodes a highly conserved protein containing a functional acyl-CoA-binding binding domain orthologous to human DBI (Diazepam Binding inhibitor) (OMIM: 125950) required for protein stability and ligand binding; acyl-CoA proteins are required for lipid droplet morphology and lipid storage function; acbp-1 mutants have reduced triglycerides, aberrant lipid droplet morphology and number in the intestine; mutants contain approximately 70% fewer but 3.8 times enlarged than that of the average lipid droplet; loss of ACBP-1 results in increased lipid chain unsaturation by 1.25 times; disruption of ACBP-1 function significantly reduces worm life span from 14 to 9 days; ACBP-1::GFP is predominantly expressed in intestine of L4 larvae.Paper_evidenceWBPaper00038378
Curator_confirmedWBPerson12884
WBPerson1843
Date_last_updated16 May 2011 00:00:00
Automated_descriptionPredicted to enable long-chain fatty acyl-CoA binding activity. Involved in determination of adult lifespan and lipid storage. Is an ortholog of human DBI (diazepam binding inhibitor, acyl-CoA binding protein).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC44E4.6
Corresponding_transcriptC44E4.6.1
C44E4.6.2
Other_sequenceGR14873
Tcir_isotig20858
Tcol_isotig21312
MH10887
JI472356.1
ASC17443_1
Dviv_isotig15304
Tcir_isotig10732
ES408833.1
Acan_isotig12435
Associated_featureWBsf649109
WBsf649110
WBsf664159
WBsf219293
WBsf219294
Experimental_infoRNAi_resultWBRNAi00023965Inferred_automaticallyRNAi_primary
WBRNAi00023089Inferred_automaticallyRNAi_primary
WBRNAi00023677Inferred_automaticallyRNAi_primary
WBRNAi00042488Inferred_automaticallyRNAi_primary
WBRNAi00076215Inferred_automaticallyRNAi_primary
WBRNAi00023165Inferred_automaticallyRNAi_primary
WBRNAi00029810Inferred_automaticallyRNAi_primary
WBRNAi00001450Inferred_automaticallyRNAi_primary
WBRNAi00003156Inferred_automaticallyRNAi_primary
Expr_pattern (7)
Drives_constructWBCnstr00039882
Construct_productWBCnstr00039882
Microarray_results (20)
Expression_cluster (131)
Interaction (40)
Map_infoMapIPosition-1.03673Error0.000586
PositivePositive_cloneC44E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027468
WBPaper00033353
WBPaper00038378
WBPaper00038491
WBPaper00039062
WBPaper00049828
WBPaper00055090
WBPaper00063976
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene