WormBase Tree Display for Gene: WBGene00015574

WBGene00015574 SMap: S_parent: Sequence: C07G3
  Identity: Version: 2
    Name: CGC_name: irg-1 Person_evidence: WBPerson3965
      Sequence_name: C07G3.2
      Molecular_name: C07G3.2
        C07G3.2.1
        CE07993
      Other_name: CELE_C07G3.2 Accession_evidence: NDB BX284605
      Public_name: irg-1
    DB_info: Database: AceView gene 5D999
        WormQTL gene WBGene00015574
        WormFlux gene WBGene00015574
        NDB locus_tag CELE_C07G3.2
        NCBI gene 182379
        RefSeq protein NM_071582.5
        TREEFAM TREEFAM_ID TF316991
        TrEMBL UniProtAcc O16327
        UniProt_GCRP UniProtAcc O16327
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:56 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 13 Jul 2009 13:51:47 WBPerson9133 Name_change: CGC_name: irg-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: irg
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00027834
      00027835
      00105960
      00105967
      00105968
    Ortholog: WBGene00057825 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028585 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00148174 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00125295 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00091737 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00133799 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00219065 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00194312 Caenorhabditis brenneri From_analysis: Inparanoid_8
      CBOVI.g1669 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8403 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6059 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8549 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g8550 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2339 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2340 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2342 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2343 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2344 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2345 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g2346 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP39.g5266 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g5267 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24045 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_V.g18155 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g21661 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01729.g22761 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_07844.g38200 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12936 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_019516 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g12774 Panagrellus redivivus From_analysis: WormBase-Compara
      chrV_pilon.g13769 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00302151 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00007440 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00020747 Caenorhabditis elegans From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00010436 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012927 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00012968 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016495 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00020052 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description (2)
  Molecular_info: Corresponding_CDS: C07G3.2
    Corresponding_transcript: C07G3.2.1
    Other_sequence: CBC16326_1
    Associated_feature: WBsf231582
  Experimental_info: RNAi_result: WBRNAi00040026 Inferred_automatically: RNAi_primary
      WBRNAi00010403 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8898
      Expr1028122
      Expr1144099
      Expr2012816
      Expr2031055
    Drives_construct: WBCnstr00005926
      WBCnstr00013591
      WBCnstr00028740
    Construct_product: WBCnstr00020134
      WBCnstr00028740
    Microarray_results (19)
    Expression_cluster (303)
    Interaction (63)
    WBProcess: WBbiopr:00000008
      WBbiopr:00000039
  Map_info: Map: V Position: -10.3139 Error: 0.017317
    Positive: Positive_clone: C07G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (17)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene