WormBase Tree Display for Gene: WBGene00011737

WBGene00011737 SMap: S_parent: Sequence: T12G3
  Identity: Version: 2
    Name: CGC_name: sqst-1 Paper_evidence: WBPaper00042170
          Person_evidence: WBPerson716
      Sequence_name: T12G3.1
      Molecular_name: T12G3.1a
        T12G3.1a.1
        CE37554
        T12G3.1b
        CE45860
        T12G3.1b.1
      Other_name: CELE_T12G3.1 Accession_evidence: NDB BX284604
      Public_name: sqst-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Apr 2013 16:46:51 WBPerson2970 Name_change: CGC_name: sqst-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sqst
    Allele (53)
    Strain: WBStrain00001490
      WBStrain00037114
      WBStrain00037157
    Component_of_genotype: WBGenotype00000083
      WBGenotype00000084
    RNASeq_FPKM (74)
    GO_annotation (13)
    Ortholog: WBGene00066320 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00075143 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00028520 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141528 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00184953 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00178976 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00118726 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222285 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g13457 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11003 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7698 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g11055 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g11546 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g7351 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17581 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-sqst-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11860 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01230.g19434 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04878 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014221 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07241 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40235810 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11982 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243936 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304488 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00304611 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00292073 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0003231 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoInspector
            Panther
      ZFIN:ZDB-GENE-040426-2204 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      HGNC:11280 Homo sapiens From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      MGI:107931 Mus musculus From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
      RGD:69287 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoInspector
            Panther
    Paralog: WBGene00012067 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012516 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00015552 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021495 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description (2)
  Disease_info: Experimental_model: DOID:332 Homo sapiens Paper_evidence: WBPaper00066343
          Curator_confirmed: WBPerson324
          Date_last_updated: 31 Aug 2021 00:00:00
    Potential_model (5)
  Models_disease_asserted: WBDOannot00001040
  Molecular_info: Corresponding_CDS: T12G3.1a
      T12G3.1b
    Corresponding_CDS_history: T12G3.1:wp132
    Corresponding_transcript: T12G3.1a.1
      T12G3.1b.1
    Other_sequence: CBC08481_1
      CR00634
      CRC06360_1
      CBC06086_1
      CR03354
      CBC12582_1
      CR01694
      CJC06184_1
      CRC08734_1
      CRC12404_1
    Associated_feature: WBsf646442
      WBsf660776
      WBsf660777
      WBsf660778
      WBsf981832
      WBsf998015
      WBsf1018314
      WBsf229233
      WBsf229234
      WBsf229235
  Experimental_info: RNAi_result: WBRNAi00113609 Inferred_automatically: RNAi_primary
      WBRNAi00114688 Inferred_automatically: RNAi_primary
      WBRNAi00033299 Inferred_automatically: RNAi_primary
      WBRNAi00018644 Inferred_automatically: RNAi_primary
      WBRNAi00053225 Inferred_automatically: RNAi_primary
    Expr_pattern (19)
    Drives_construct: WBCnstr00002349
      WBCnstr00004318
      WBCnstr00006906
      WBCnstr00014783
      WBCnstr00030429
    Construct_product: WBCnstr00006906
      WBCnstr00019922
      WBCnstr00030429
    Antibody: WBAntibody00002145
      WBAntibody00002774
      WBAntibody00002865
      WBAntibody00002887
    Microarray_results (23)
    Expression_cluster (335)
    Interaction (77)
  Map_info: Map: IV Position: 5.51952
    Positive: Positive_clone: T12G3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (36)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene