WormBase Tree Display for Sequence: T12G3
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| T12G3 | DNA | T12G3 | 26246 | |||
|---|---|---|---|---|---|---|
| SMap | S_child | Gene_child | WBGene00011741 | 4033 | 2813 | |
| WBGene00011740 | 4086 | 4916 | ||||
| WBGene00000270 | 23977 | 22612 | ||||
| WBGene00011739 | 21018 | 22690 | ||||
| WBGene00011737 | 7044 | 9653 | ||||
| WBGene00235284 | 2534 | 2466 | ||||
| WBGene00201015 | 15601 | 15750 | ||||
| WBGene00011738 | 19729 | 11742 | ||||
| WBGene00200018 | 19908 | 19763 | ||||
| CDS_child (237) | ||||||
| Transcript (25) | ||||||
| Nongenomic | yk185d7 | 2925 | 3270 | |||
| yk364d8 | 21254 | 22644 | ||||
| PCR_product (24) | ||||||
| Allele (329) | ||||||
| Oligo_set | Aff_T12G3.1 | 8835 | 9482 | |||
| Aff_T12G3.2 | 13024 | 11987 | ||||
| Aff_T12G3.4 | 22022 | 22621 | ||||
| Aff_T12G3.5 | 4089 | 4788 | ||||
| Aff_T12G3.6 | 3979 | 3018 | ||||
| Feature_object (436) | ||||||
| Feature_data | T12G3:Polysome | 1 | 26246 | |||
| T12G3:TranscriptionallyActiveRegion | 1 | 26246 | ||||
| T12G3:ChIPSeqTF | 1 | 26246 | ||||
| T12G3:TRF | 1 | 26246 | ||||
| T12G3:Dust | 1 | 26246 | ||||
| T12G3:inverted | 1 | 26246 | ||||
| Homol_data (21) | ||||||
| Structure | From | Source | CHROMOSOME_IV | |||
| Overlap_right | K08E4 | 26146 | ||||
| Overlap_left | Y40D7A | |||||
| Clone_left_end | T12G3 | 1 | ||||
| K08E4 | 26146 | |||||
| DB_info | Database | EMBL | NDB_AC | Z68752 | ||
| NDB_SV | Z68752.1 | |||||
| Keyword | HTG | |||||
| EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
| Origin | From_author | Sims MA | ||||
| From_laboratory | HX | |||||
| Date_directory | 960117 | |||||
| Species | Caenorhabditis elegans | |||||
| Strain | WBStrain00000001 | |||||
| Visible | Clone | T12G3 | ||||
| Properties | Genomic_canonical | |||||
| Checksum | MD5 | f81f44cb8bb12c605d9e47a084d5962e | ||||
| Status | Finished | 17 Jan 1996 00:00:00 | ||||
| Submitted | 19 Jan 1996 00:00:00 | |||||
| Annotated | 18 Jan 1996 00:00:00 | |||||
| Map | Sequence-IV | Ends | Left | 6226 | ||
| Right | 6236 | |||||
| Interpolated_map_position | IV | 5.52552 | ||||
| Assembly_tags | Clone left end | 1 | 4 | Left hand end of T12G3. | ||
| 26162 | 26162 | |||||
| 26146 | 26149 | Left hand end of K08E4. | ||||
| Finished Left | 1 | 1 | ||||
| annotation | 10781 | 10811 | These 31 bases are in an inverted repeat region. They only have one strand covering them which is terminated. | |||
| 21642 | 21647 | Reads coming through run of Gs second set of Gs have 6 clear Gs these 6 bases are unclear region complicated by possible hairpin between GAA and following TTC regions, edited to best read. | ||||
| Finished Right | 26246 | 26246 | ||||
| Method | Genomic_canonical |
