WormBase Tree Display for Sequence: Y40D7A
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Y40D7A | DNA | Y40D7A | 2513 | |||
---|---|---|---|---|---|---|
SMap | S_child | CDS_child | Y40D7A.gc1 | 2450 | 2350 | |
Allele (26) | ||||||
Oligo_set | Aff_T12G3.7 | 3536 | 2350 | |||
Feature_object (24) | ||||||
Feature_data | Y40D7A:Polysome | 1 | 2513 | |||
Y40D7A:TranscriptionallyActiveRegion | 1 | 2513 | ||||
Y40D7A:ChIPSeqTF | 1 | 2513 | ||||
Y40D7A:TRF | 1 | 2513 | ||||
Y40D7A:Dust | 1 | 2513 | ||||
Y40D7A:inverted | 1 | 2513 | ||||
Homol_data | Y40D7A:wublastx_japonica | 1 | 2513 | |||
Y40D7A:RepeatMasker | 1 | 2513 | ||||
Structure | From | Source | CHROMOSOME_IV | |||
Overlap_right | T12G3 | 2414 | ||||
Overlap_left | Y64F11A | |||||
Clone_left_end | Y40D7 | 1 | ||||
T12G3 | 2414 | |||||
Y40D7A | 1 | |||||
Clone_right_end | Y64F11 | 198 | ||||
Y40D7A | 2513 | |||||
DB_info | Database | EMBL | NDB_AC | AL023840 | ||
NDB_SV | AL023840.1 | |||||
Secondary_accession | AL021150 | |||||
Keyword | HTG | |||||
EMBL_dump_info | EMBL_dump_method | worm_EMBL-dump | ||||
Origin | From_author | Wallis JM | ||||
From_laboratory | HX | |||||
Date_directory | 980131 | |||||
Species | Caenorhabditis elegans | |||||
Strain | WBStrain00000001 | |||||
Visible | Clone | Y40D7A | ||||
Properties | Genomic_canonical | |||||
Checksum | MD5 | 7c1e61af4aad13900372fc15f13de7ee | ||||
Status | Finished | 31 Jan 1998 00:00:00 | ||||
Submitted | 09 Jun 1998 00:00:00 | |||||
Annotated | 10 Feb 1998 00:00:00 | |||||
Map | Sequence-IV | Ends | Left | 6193 | ||
Right | 6229 | |||||
Interpolated_map_position | IV | 5.50723 | ||||
Assembly_tags | Finished Left | 1 | 4 | Y40D7A | ||
Clone left end | 1 | 6 | Y40D7 | |||
2414 | 2417 | T12G3 | ||||
Clone right end | 193 | 198 | Y64F11 | |||
Finished Right | 2510 | 2513 | Y40D7A | |||
annotation | 1 | 639 | Overlap with Y64F11 consists entirely of a 32bp tandem repeat sequence. We are unable to tell whether there are any copies of repeat missing from this assembly. | |||
Method | Genomic_canonical |