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WormBase Tree Display for Gene: WBGene00008476

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Name Class

WBGene00008476SMapS_parentSequenceE03H4
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (52)
StrainWBStrain00033060
RNASeq_FPKM (74)
GO_annotation00116370
00116371
00116372
00116373
OrthologWBGene00159270Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00151271Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00209548Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00073531Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00070256Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00040372Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00233948Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g11039Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4996Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g17273Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19303Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7838Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g15621Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4658Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6167Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g6603Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22150Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00092.g4099Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_04997.g19274Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13240.g24149Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-copb-2Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp5_scaffold_06287.g36332Caenorhabditis sinicaFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10252Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4211Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40344000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g2495Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00130919Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00241811Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00103197Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259119Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287707Trichuris murisFrom_analysisWormBase-Compara
SGD:S000003105Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
FB:FBgn0025724Drosophila melanogasterFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
ZFIN:ZDB-GENE-010724-7Danio rerioFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
MGI:1354962Mus musculusFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
RGD:628746Rattus norvegicusFrom_analysisEnsEMBL-Compara
OrthoFinder
PhylomeDB
ParalogWBGene00009542Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00022119Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00270321Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionE03H4.8 encodes one of two C. elegans proteins with similarity to the beta' coat protein of the COPI vesicular coat; by homology, E03H4.8 is required for retrograde trafficking from the cis-Golgi to the endoplasmic reticulum and trafficking within the Golgi stack; in C. elegans, RNAi experiments indicate that E03H4.8 is required for proper germ cell development and reproduction; about 10% to 20% of E03H4.8 transcripts are RNA edited to change A to G resulting in a change to residue 331 from an S to a G.Paper_evidenceWBPaper00045975
WBPaper00041129
WBPaper00038381
Curator_confirmedWBPerson1843
WBPerson4025
Date_last_updated28 Dec 2014 00:00:00
Automated_descriptionPredicted to enable structural molecule activity. Predicted to be involved in intracellular protein transport and vesicle-mediated transport. Predicted to be part of membrane coat.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE03H4.8
Corresponding_transcriptE03H4.8.1
E03H4.8.2
Other_sequenceCJC14185_1
Associated_featureWBsf649662
WBsf716957
WBsf220428
Experimental_infoRNAi_result (12)
Expr_patternExpr1027574
Expr1033687
Expr1147644
Expr2002153
Expr2020373
Drives_constructWBCnstr00032941
Construct_productWBCnstr00032941
Microarray_results (15)
Expression_cluster (208)
InteractionWBInteraction000519797
WBInteraction000580597
Map_infoPositivePositive_cloneE03H4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI13.197
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00064339
MethodGene