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WormBase Tree Display for Gene: WBGene00003864

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Name Class

WBGene00003864SMapS_parentSequenceCHROMOSOME_IV
IdentityVersion1
NameCGC_nameoma-1Person_evidenceWBPerson374
Sequence_nameC09G9.6
Molecular_nameC09G9.6
C09G9.6.1
CE03005
Other_namemoe-1
CELE_C09G9.6Accession_evidenceNDBBX284604
Public_nameoma-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classoma
Allele (56)
Strain (8)
RNASeq_FPKM (74)
GO_annotation (55)
Contained_in_operonCEOP4312
OrthologWBGene00040414Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00077396Caenorhabditis remaneiFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00127384Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00061597Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00121093Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00193151Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00064784Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00141052Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00127525Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00107947Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
WBGene00227668Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12873Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g10034Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20361Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g20725Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g12512Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g7932Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27325Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g12756Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g12759Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g5337Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g9207Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g3719Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22195Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g3251Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00579.g12424Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_12481.g23779Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_IV.g13103Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15223Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01285.g19860Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_02281.g25782Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19900Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24769Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_008852Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_008974Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02665Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g2109Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40348000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g11189Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00246572Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266462Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000004126Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SonicParanoid
SGD:S000002558Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Panther
SonicParanoid
FB:FBgn0011837Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
Panther
ZFIN:ZDB-GENE-990806-20Danio rerioFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
HGNC:1107Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
HGNC:1108Homo sapiensFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
MGI:99180Mus musculusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
PhylomeDB
SonicParanoid
RGD:62009Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
SonicParanoid
RGD:620722Rattus norvegicusFrom_analysisEnsEMBL-Compara
Panther
PhylomeDB
SonicParanoid
RGD:1308913Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
SonicParanoid
Paralog (20)
Structured_descriptionConcise_descriptionoma-1 encodes a zinc finger protein of the TIS11 finger type that is paralogous to OMA-2; while either oma-1 or oma-2 individually have no obvious mutant phenotype, oma-1 and oma-2 doubly mutant animals show defects in oocyte maturation, indicating that the two genes function redundantly in this process; whereas normal oocytes are released from meiotic prophase I arrest during oocyte maturation, oma-1;oma-2 mutant oocytes initiate, but fail to complete, maturation, arresting at a defined point in meiotic prophase I; the meiotic arrest of oma-1;oma-2 mutant oocytes is suppressed by wee-1.3(RNAi), implying that progression through meiotic prophase I is critically dependent on inhibition of WEE-1.3 by either OMA-1 or OMA-2; OMA-1 is expressed primarily in maturing oocytes, is cytoplasmic and visible prior to cellularization.Paper_evidenceWBPaper00005198
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated19 Mar 2012 00:00:00
Automated_descriptionEnables mRNA 3'-UTR AU-rich region binding activity and mRNA regulatory element binding translation repressor activity. Involved in several processes, including negative regulation of cell differentiation; oocyte development; and regulation of reproductive process. Located in P granule and centrosome. Part of messenger ribonucleoprotein complex. Expressed in several structures, including head muscle; neurons; oocyte; somatic nervous system; and vulva. Is an ortholog of human ZFP36L1 (ZFP36 ring finger protein like 1) and ZFP36L2 (ZFP36 ring finger protein like 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelEFO:MONDO:0014769Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:1108)
Molecular_infoCorresponding_CDSC09G9.6
Corresponding_transcriptC09G9.6.1
Other_sequenceXIC01512_1
HG11531
XI03775
SRC08713_1
FC813056.1
Associated_feature (15)
Gene_product_bindsWBsf034245
Transcription_factorWBTranscriptionFactor000116
Experimental_infoRNAi_result (29)
Expr_pattern (16)
Drives_construct (13)
Construct_product (14)
AntibodyWBAntibody00000486
WBAntibody00000547
WBAntibody00001073
WBAntibody00001074
WBAntibody00001087
WBAntibody00001664
WBAntibody00002447
Microarray_results (20)
Expression_cluster (207)
Interaction (354)
WBProcessWBbiopr:00000068
WBbiopr:00000073
Map_infoMapIVPosition3.99916Error0.001096
PositivePositive_cloneC09G9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point7138
Multi_point4054
4056
4064
4065
Reference (94)
PictureWBPicture0000013094
RemarkWeak rescue of the zu405 embryonic lethality [Lin, R][021017 ck1]
Sequence connection based on Lin, R [021017 ck1]
Sequence connection from [Shimada M], [krb 020711]
Postitive method is weak rescue of the zu405 embryonic lethality
MethodGene