WormBase Tree Display for Gene: WBGene00002258

WBGene00002258 SMap: S_parent: Sequence: W02D3
  Identity: Version: 1
    Name: CGC_name: lbp-6 Person_evidence: WBPerson492
      Sequence_name: W02D3.5
      Molecular_name: W02D3.5
        W02D3.5.1
        CE14426
      Other_name: CELE_W02D3.5 Accession_evidence: NDB BX284601
      Public_name: lbp-6
    DB_info: Database: AceView gene 1H304
        WormQTL gene WBGene00002258
        WormFlux gene WBGene00002258
        NDB locus_tag CELE_W02D3.5
        Panther gene CAEEL|WormBase=WBGene00002258|UniProtKB=O01812
          family PTHR11955
        NCBI gene 172390
        RefSeq protein NM_059525.7
        SwissProt UniProtAcc O01812
        UniProt_GCRP UniProtAcc O01812
        OMIM gene 170715
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:27 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lbp
    Allele (17)
    Strain: WBStrain00037907
    RNASeq_FPKM (74)
    GO_annotation: 00025784
      00025785
      00025786
      00025787
      00025788
      00025789
      00110323
    Ortholog: WBGene00056153 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033620 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158367 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00099201 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00128212 Caenorhabditis japonica From_analysis: OMA
            WormBase-Compara
      WBGene00191869 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      CBOVI.g10660 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g10081 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g756 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21556 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3303 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23598 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3418 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10821 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21104 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g7900 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1668 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g28858 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4852 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00017.g1102 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00017.g1104 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00646.g13105 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02802.g17529 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_I.g2530 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g14694 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00500.g12150 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22806 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_001829 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05782 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_10336500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1226 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00110551 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274803 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00274885 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00255809 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264346 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264348 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00264349 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00292732 Trichuris muris From_analysis: WormBase-Compara
      WBGene00294711 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0037913 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-020318-2 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3559 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3557 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3562 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:9117 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:3563 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:34524 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:101916 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:95476 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:620285 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:69048 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:69309 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:69312 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1565000 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1585218 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00002255 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00002257 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00002259 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00002260 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00021486 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable fatty acid binding activity. Predicted to be involved in fatty acid transport. Predicted to be located in cytosol and nucleus. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; Charcot-Marie-Tooth disease type 1G; Down syndrome; and artery disease (multiple). Is an ortholog of several human genes including FABP3 (fatty acid binding protein 3); FABP4 (fatty acid binding protein 4); and FABP7 (fatty acid binding protein 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
      DOID:9352 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
      DOID:14250 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
      DOID:5844 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
      DOID:10591 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3559)
      DOID:10763 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
      DOID:3068 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3562)
      DOID:0111560 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:9117)
      DOID:9970 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:3557)
  Molecular_info: Corresponding_CDS: W02D3.5
    Corresponding_transcript: W02D3.5.1
    Other_sequence (277)
    Associated_feature: WBsf649253
      WBsf981032
      WBsf219624
      WBsf219625
  Experimental_info: RNAi_result (20)
    Expr_pattern: Expr1015324
      Expr1031330
      Expr1158134
      Expr2013023
      Expr2031255
    Drives_construct: WBCnstr00036353
    Construct_product: WBCnstr00036353
    Microarray_results (18)
    Expression_cluster (233)
    Interaction (75)
  Map_info (3)
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene