WormBase Tree Display for Gene: WBGene00001790

WBGene00001790 Evidence: Person_evidence: WBPerson1846
  SMap: S_parent: Sequence: D1053
  Identity: Version: 1
    Name: CGC_name: gst-42
      Sequence_name: D1053.1
      Molecular_name: D1053.1
        D1053.1.1
        CE03099
      Other_name: CELE_D1053.1 Accession_evidence: NDB BX284606
      Public_name: gst-42
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:25 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: gst
    Allele (32)
    Strain: WBStrain00033920
      WBStrain00032388
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00051053 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00023684 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00111014 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00134124 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00190041 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00116955 Pristionchus pacificus From_analysis: Inparanoid_8
      CSP21.g8034 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19539 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3566 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g26 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g13469 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP40.g23028 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-gst-42 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g18681 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01199.g19189 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03517 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025097 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01930 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3612 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g3613 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g689 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0181000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20122 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00119055 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00279016 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00255971 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0037696 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0037697 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040718-184 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:4643 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1341859 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1589363 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00021817 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001791 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00001365 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001371 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00001792 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008920 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015337 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016204 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019636 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00043097 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: gst-42 is orthologous to the human gene GLUTATHIONE TRANSFERASE ZETA-1 (also known as MALEYLACETOACETATE ISOMERASE; GSTZ1; OMIM:603758), which when mutated is thought to lead to a variety of type I tyrosinemia. Curator_confirmed: WBPerson1823
            WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables identical protein binding activity. Predicted to be involved in L-phenylalanine catabolic process and glutathione metabolic process. Predicted to be located in mitochondrion. Expressed in intestine. Is an ortholog of human GSTZ1 (glutathione S-transferase zeta 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: D1053.1
    Corresponding_transcript: D1053.1.1
    Other_sequence (27)
    Associated_feature: WBsf654443
      WBsf671056
      WBsf671057
      WBsf1007098
      WBsf1023927
      WBsf237997
      WBsf237998
      WBsf237999
      WBsf238000
      WBsf238001
  Experimental_info: RNAi_result: WBRNAi00115551 Inferred_automatically: RNAi_primary
      WBRNAi00043381 Inferred_automatically: RNAi_primary
      WBRNAi00030339 Inferred_automatically: RNAi_primary
      WBRNAi00115488 Inferred_automatically: RNAi_primary
      WBRNAi00012524 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram232
      Expr3792
      Expr1015984
      Expr1031053
      Expr1147367
      Expr2012325
      Expr2030562
    Drives_construct: WBCnstr00001071
      WBCnstr00011663
      WBCnstr00015944
      WBCnstr00036682
    Construct_product: WBCnstr00036682
    Microarray_results (19)
    Expression_cluster (204)
    Interaction (60)
  Map_info (3)
  Reference: WBPaper00006465
    WBPaper00031468
    WBPaper00032062
    WBPaper00035663
    WBPaper00038491
    WBPaper00055090
    WBPaper00057218
    WBPaper00065140
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene