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WormBase Tree Display for Gene: WBGene00001241

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Name Class

WBGene00001241SMapS_parentSequenceD2024
IdentityVersion1
Name (5)
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:23WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classelo
Allele (31)
StrainWBStrain00003551
WBStrain00031622
WBStrain00035860
WBStrain00002565
RNASeq_FPKM (74)
GO_annotation (21)
OrthologWBGene00068686Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00075163Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00028195Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00146508Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00096834Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00163367Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00157171Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00162343Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00194449Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00151065Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00157116Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00143246Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00163069Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00162438Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00183545Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00179164Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00136020Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00136264Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00135035Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00175438Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00216714Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00070277Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00070278Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00083418Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069555Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064002Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00064003Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00138707Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00131995Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00223300Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g8810Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g16240Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g1924Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g22184Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g22280Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g4851Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5331Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6690Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g4472Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18752Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23770Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00183.g6412Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-elo-3Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21136Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00088.g3900Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20904Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_013894Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10415Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g6917Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_40294000Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIV_pilon.g10796Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00240758Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266120Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00294083Trichuris murisFrom_analysisWormBase-Compara
SGD:S000004364Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoFinder
OrthoInspector
SonicParanoid
SGD:S000003732Saccharomyces cerevisiaeFrom_analysisInparanoid
OrthoFinder
OrthoInspector
SonicParanoid
FB:FBgn0260960Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-030114-1Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040718-309Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ZFIN:ZDB-GENE-031110-3Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:15829Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:18047Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:1195976Mus musculusFrom_analysisHieranoid
OMA
OrthoFinder
OrthoInspector
Panther
MGI:2156528Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:620585Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1307263Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OMA
OrthoFinder
OrthoInspector
Panther
ParalogWBGene00001239Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001240Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001243Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001245Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001246Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00001247Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001242Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00001244Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionThe elo-3 gene encodes a paralog of elo-1 and elo-2, each of which encodes a polyunsaturated fatty acid (PUFA) elongase; ELO-3 may be required for normally rapid growth.Paper_evidenceWBPaper00004162
WBPaper00005654
WBPaper00005728
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable fatty acid elongase activity. Predicted to be involved in fatty acid biosynthetic process and sphingolipid biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Expressed in tail. Is an ortholog of human ELOVL3 (ELOVL fatty acid elongase 3) and ELOVL6 (ELOVL fatty acid elongase 6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSD2024.3
Corresponding_CDS_historyD2024.3:wp105
D2024.3b:wp240
Corresponding_transcriptD2024.3.1
Other_sequence (58)
Associated_featureWBsf646073
WBsf996911
WBsf996912
WBsf996913
WBsf996914
WBsf1017668
WBsf1017669
Experimental_infoRNAi_result (21)
Expr_patternChronogram545
Chronogram1511
Expr5623
Expr5624
Expr1014581
Expr1030787
Expr1147455
Expr2011280
Expr2029516
Drives_constructWBCnstr00003128
WBCnstr00004553
WBCnstr00037018
Construct_productWBCnstr00037018
Microarray_results (20)
Expression_cluster (84)
Interaction (31)
Map_infoMapIVPosition3.31072Error0.001052
PositivePositive_cloneD2024Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point4912
Pseudo_map_position
Reference (14)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene