WormBase Tree Display for Gene: WBGene00001007

WBGene00001007 Evidence: CGC_data_submission
  SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: CGC_name: dli-1 Person_evidence: WBPerson237
      Sequence_name: C39E9.14
      Molecular_name: C39E9.14a
        C39E9.14a.1
        CE30892
        C39E9.14b
        CE30893
        C39E9.14b.1
      Other_name: CELE_C39E9.14 Accession_evidence: NDB BX284604
      Public_name: dli-1
    DB_info: Database: AceView gene 4N862
        WormQTL gene WBGene00001007
        WormFlux gene WBGene00001007
        NDB locus_tag CELE_C39E9.14
        Panther gene CAEEL|WormBase=WBGene00001007|UniProtKB=G5ED34
          family PTHR12688
        NCBI gene 178260
        RefSeq protein NM_070117.10
            NM_070118.7
        TREEFAM TREEFAM_ID TF314138
        TrEMBL UniProtAcc G5ECK7
            G5ED34
        UniProt_GCRP UniProtAcc G5ED34
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:22 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dli
    Allele (34)
    Strain: WBStrain00026521
    RNASeq_FPKM (74)
    GO_annotation (21)
    Ortholog: WBGene00025011 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062728 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00101503 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00151504 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00217031 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00064342 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00193650 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00122953 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00163473 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00222935 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8965 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g897 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g15245 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g13819 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g6967 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g14377 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g26728 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14402 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19574 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3231 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g8291 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2358 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00245.g7791 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-dli-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10917 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g10918 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00041.g2196 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19436 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014496 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05720 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15801 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40145200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g12219 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248738 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00260403 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00287794 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0030276 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-030131-4108 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-050417-156 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:2966 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:18745 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      MGI:107738 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            SonicParanoid
      MGI:2135610 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621130 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:71072 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00006960 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Concise_description: dli-1 encodes a dynein light intermediate chain; dli-1 activity, presumably as part of a cytoplasmic dynein minus-end-directed motor complex, is required for mitoses throughout development, for pronuclear and nuclear migration, and for normal neuronal function; DLI-1 has been shown to physically interact with the ZYG-12 HOOK-domain containing protein and the UNC-16 JIP3 (c-Jun N-terminal kinase (JNK)-interacting protein 3) protein. Paper_evidence: WBPaper00004901
            WBPaper00006310
            WBPaper00006494
            WBPaper00038128
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Mar 2011 00:00:00
      Automated_description: Predicted to enable dynein heavy chain binding activity. Involved in regulation of dendrite morphogenesis and retrograde axonal transport. Located in microtubule plus-end and neuron projection. Expressed in ciliated neurons; hypodermis; and pharynx. Is an ortholog of human DYNC1LI2 (dynein cytoplasmic 1 light intermediate chain 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C39E9.14a
      C39E9.14b
    Corresponding_transcript: C39E9.14a.1
      C39E9.14b.1
    Other_sequence (49)
    Associated_feature: WBsf652325
      WBsf981838
      WBsf998329
      WBsf231085
      WBsf231086
      WBsf231087
      WBsf231088
  Experimental_info: RNAi_result (30)
    Expr_pattern: Expr9590
      Expr11532
      Expr12314
      Expr1010675
      Expr1030628
      Expr1146210
      Expr2010949
      Expr2029188
    Drives_construct: WBCnstr00014154
      WBCnstr00020989
      WBCnstr00037144
    Construct_product: WBCnstr00014821
      WBCnstr00019061
      WBCnstr00020989
      WBCnstr00037144
    Antibody: WBAntibody00002067
    Microarray_results (28)
    Expression_cluster (103)
    Interaction (88)
  Map_info (4)
  Reference (18)
  Remark: Sequence connection from [Yoder J, Han M]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene