WormBase Tree Display for Gene: WBGene00002258
expand all nodes | collapse all nodes | view schema
WBGene00002258 | SMap | S_parent | Sequence | W02D3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | lbp-6 | Person_evidence | WBPerson492 | |||||
Sequence_name | W02D3.5 | ||||||||
Molecular_name | W02D3.5 | ||||||||
W02D3.5.1 | |||||||||
CE14426 | |||||||||
Other_name | CELE_W02D3.5 | Accession_evidence | NDB | BX284601 | |||||
Public_name | lbp-6 | ||||||||
DB_info | Database | AceView | gene | 1H304 | |||||
WormQTL | gene | WBGene00002258 | |||||||
WormFlux | gene | WBGene00002258 | |||||||
NDB | locus_tag | CELE_W02D3.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00002258|UniProtKB=O01812 | |||||||
family | PTHR11955 | ||||||||
NCBI | gene | 172390 | |||||||
RefSeq | protein | NM_059525.7 | |||||||
SwissProt | UniProtAcc | O01812 | |||||||
UniProt_GCRP | UniProtAcc | O01812 | |||||||
OMIM | gene | 170715 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:27 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | lbp | ||||||||
Allele (17) | |||||||||
Strain | WBStrain00037907 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00025784 | ||||||||
00025785 | |||||||||
00025786 | |||||||||
00025787 | |||||||||
00025788 | |||||||||
00025789 | |||||||||
00110323 | |||||||||
Ortholog (56) | |||||||||
Paralog | WBGene00002255 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00002257 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002259 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00002260 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021486 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable fatty acid binding activity. Predicted to be involved in fatty acid transport. Predicted to be located in cytosol and nucleus. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease; Charcot-Marie-Tooth disease type 1G; Down syndrome; and artery disease (multiple). Is an ortholog of several human genes including FABP3 (fatty acid binding protein 3); FABP4 (fatty acid binding protein 4); and FABP7 (fatty acid binding protein 7). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:10652 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||||
DOID:14250 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||||
DOID:5844 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||||
DOID:10591 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3559) | ||||||
DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||||
DOID:3068 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3562) | ||||||
DOID:0111560 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9117) | ||||||
DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3557) | ||||||
Molecular_info | Corresponding_CDS | W02D3.5 | |||||||
Corresponding_transcript | W02D3.5.1 | ||||||||
Other_sequence (277) | |||||||||
Associated_feature | WBsf649253 | ||||||||
WBsf981032 | |||||||||
WBsf219624 | |||||||||
WBsf219625 | |||||||||
Experimental_info | RNAi_result (20) | ||||||||
Expr_pattern | Expr1015324 | ||||||||
Expr1031330 | |||||||||
Expr1158134 | |||||||||
Expr2013023 | |||||||||
Expr2031255 | |||||||||
Drives_construct | WBCnstr00036353 | ||||||||
Construct_product | WBCnstr00036353 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (233) | |||||||||
Interaction (75) | |||||||||
Map_info | Map | I | Position | 1.3 | Error | 0.00019 | |||
Positive | Positive_clone | W02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |