WormBase Tree Display for Gene: WBGene00020281
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WBGene00020281 | SMap | S_parent | Sequence | T06A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | T06A4.1 | |||||||
Molecular_name | T06A4.1a | ||||||||
T06A4.1a.1 | |||||||||
CE52652 | |||||||||
T06A4.1b | |||||||||
CE33169 | |||||||||
T06A4.1a.2 | |||||||||
T06A4.1b.1 | |||||||||
Other_name | CELE_T06A4.1 | Accession_evidence | NDB | BX284601 | |||||
Public_name | T06A4.1 | ||||||||
DB_info | Database (10) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (102) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (65) | |||||||||
Paralog | WBGene00008521 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00011235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00012168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00013895 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021213 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021645 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020283 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021984 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004747 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Behcet's disease; familial febrile seizures 11; and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:1184 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:2228 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:13241 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:0060752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
DOID:784 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:0111308 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
Molecular_info | Corresponding_CDS | T06A4.1a | |||||||
T06A4.1b | |||||||||
Corresponding_CDS_history | T06A4.1a:wp142 | ||||||||
T06A4.1a:wp265 | |||||||||
Corresponding_transcript | T06A4.1a.1 | ||||||||
T06A4.1a.2 | |||||||||
T06A4.1b.1 | |||||||||
Other_sequence (21) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00004146 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089150 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052612 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022402 | ||||||||
Expr1038832 | |||||||||
Expr1156218 | |||||||||
Expr2005917 | |||||||||
Expr2024133 | |||||||||
Drives_construct | WBCnstr00025243 | ||||||||
Construct_product | WBCnstr00025243 | ||||||||
Microarray_results | SMD_T06A4.1 | ||||||||
174378_at | |||||||||
189549_at | |||||||||
A_12_P105180 | |||||||||
Aff_T06A4.1 | |||||||||
GPL13394_WBGene00020281 | |||||||||
GPL13914_T06A4.1 | |||||||||
GPL14144_T06A4.1b_1059-1118_0.874_16_A | |||||||||
GPL14144_T06A4.1b_1264-1323_0.740_96_C | |||||||||
GPL14144_T06A4.1b_673-732_0.833_31_B | |||||||||
GPL19516_CGZ0033661 | |||||||||
GPL19516_CGZ0033662 | |||||||||
GPL21109_T06A4.1a | |||||||||
GPL3518_CE28645 | |||||||||
GPL8304_CE_WBGene00020281_A | |||||||||
GPL8304_CE_WBGene00020281_B | |||||||||
GPL8673_T06A4_1aP00406 | |||||||||
GPL8673_T06A4_1aP01138 | |||||||||
GPL8673_T06A4_1aP01633 | |||||||||
GPL8673_T06A4_1bP00406 | |||||||||
GPL8673_T06A4_1bP01138 | |||||||||
GPL8673_T06A4_1bP01714 | |||||||||
GPL9450_T06A4.1 | |||||||||
cea2.p.16558 | |||||||||
Expression_cluster (168) | |||||||||
Interaction (15) | |||||||||
Map_info | Positive | Positive_clone | T06A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -18.2648 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |