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WormBase Tree Display for Gene: WBGene00014109

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Name Class

WBGene00014109SMapS_parentSequenceZK856
IdentityVersion2
NameCGC_namechpf-1Person_evidenceWBPerson2233
Sequence_nameZK856.8
Molecular_name (3)
Other_nameCELE_ZK856.8Accession_evidenceNDBBX284605
Public_namechpf-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
214 Apr 2015 09:52:28WBPerson2970Name_changeCGC_namechpf-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classchpf
Allele (20)
StrainWBStrain00003461
RNASeq_FPKM (74)
GO_annotation (12)
Contained_in_operonCEOP5248
Ortholog (40)
ParalogWBGene00003941Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019108Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00000554Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009260Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020192Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Predicted to be located in plasma membrane. Expressed in head; intestine; tail; and in male. Human ortholog(s) of this gene implicated in spastic ataxia. Is an ortholog of human CHP1 (calcineurin like EF-hand protein 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050952Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17433)
Molecular_infoCorresponding_CDSZK856.8
Corresponding_transcriptZK856.8.1
Other_sequence (109)
Associated_featureWBsf652968
WBsf652969
WBsf234342
WBsf234343
Experimental_infoRNAi_resultWBRNAi00033583Inferred_automaticallyRNAi_primary
WBRNAi00022203Inferred_automaticallyRNAi_primary
WBRNAi00080519Inferred_automaticallyRNAi_primary
WBRNAi00027568Inferred_automaticallyRNAi_primary
WBRNAi00027110Inferred_automaticallyRNAi_primary
WBRNAi00059779Inferred_automaticallyRNAi_primary
Expr_patternExpr7265
Expr12596
Expr12597
Expr1012295
Expr1036319
Expr1163208
Expr2009997
Expr2028238
Drives_constructWBCnstr00003922
WBCnstr00022362
WBCnstr00022363
WBCnstr00029301
Construct_productWBCnstr00029301
Microarray_resultsSMD_ZK856.7
SMD_ZK856.8
173841_s_at
A_12_P110736
A_12_P154705
A_12_P154706
A_12_P154707
Aff_ZK856.8
GPL13394_WBGene00014109
GPL13914_ZK856.8
GPL14144_ZK856.8_195-254_0.914_10_A
GPL14144_ZK856.8_236-295_0.890_18_B
GPL14144_ZK856.8_439-498_0.946_1_C
GPL19516_CGZ0057676
GPL21109_ZK856.8
GPL3518_CE06665
GPL8304_CE_WBGene00014109_A
GPL8304_CE_WBGene00014109_C
GPL8673_ZK856_8P00001
GPL8673_ZK856_8P00192
GPL8673_ZK856_8P00394
GPL9450_ZK856.8
cea2.c.40554
Expression_cluster (99)
Interaction (28)
Map_infoPositivePositive_cloneZK856Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV2.32882
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00061547
MethodGene