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WormBase Tree Display for Gene: WBGene00017398

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Name Class

WBGene00017398SMapS_parentSequenceF12B6
IdentityVersion2
NameCGC_nameslc-17.6Person_evidenceWBPerson260
Sequence_nameF12B6.2
Molecular_name (11)
Other_nameCELE_F12B6.2Accession_evidenceNDBBX284601
Public_nameslc-17.6
DB_infoDatabaseAceViewgene1C821
WormQTLgeneWBGene00017398
WormFluxgeneWBGene00017398
NDBlocus_tagCELE_F12B6.2
PanthergeneCAEEL|WormBase=WBGene00017398|UniProtKB=H2KZQ1
familyPTHR11662
NCBIgene171781
RefSeqproteinNM_171833.6
NM_058546.6
NM_001306429.3
NR_131354.1
NR_131353.1
TrEMBLUniProtAccH2KZQ3
X5M917
H2KZQ1
UniProt_GCRPUniProtAccH2KZQ1
RNAcentralURSidURS0000730A4E
URS000073A07E
SpeciesCaenorhabditis elegans
HistoryVersion_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classslc
Allele (115)
RNASeq_FPKM (74)
GO_annotation00022470
00022471
00022472
00022473
00105567
00122811
00122812
Ortholog (32)
ParalogWBGene00001135Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00008000Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010755Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010758Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011556Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00011643Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012130Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015333Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022647Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00022788Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018473Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017681Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017798Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007669Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007947Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008031Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008365Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00008677Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009811Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010299Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010646Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010918Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00010931Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011185Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011349Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011688Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011717Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011718Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00011719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012085Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012443Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013088Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015271Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015272Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016003Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018268Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018429Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018918Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018920Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019187Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019655Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020157Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020583Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020584Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020700Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020906Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021028Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021157Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021158Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021219Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021220Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021223Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021226Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00302978Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable transmembrane transporter activity. Predicted to be involved in monoatomic anion transport. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF12B6.2a
F12B6.2c
F12B6.2f
Corresponding_CDS_historyF12B6.2b:wp242
F12B6.2d:wp242
Corresponding_transcriptF12B6.2d
F12B6.2e
F12B6.2a.1
F12B6.2c.1
F12B6.2f.1
Associated_featureWBsf656039
WBsf982834
WBsf1009312
Experimental_infoRNAi_resultWBRNAi00003367Inferred_automaticallyRNAi_primary
WBRNAi00004604Inferred_automaticallyRNAi_primary
WBRNAi00044431Inferred_automaticallyRNAi_primary
Expr_patternExpr1024173
Expr1148377
Expr2015862
Expr2034095
Drives_constructWBCnstr00027326
Construct_productWBCnstr00027326
Microarray_resultsSMD_F12B6.2
SMD_Y39G10B_248.C
193011_at
A_12_P111948
A_12_P117103
A_12_P150565
A_12_P150566
Aff_F12B6.2
Aff_Y39G10B_248.C
GPL13394_WBGene00017398
GPL13914_F12B6.2
GPL14144_F12B6.2a_1216-1275_0.880_18_C
GPL14144_F12B6.2a_649-708_0.894_11_B
GPL14144_F12B6.2a_835-894_0.900_10_A
GPL19516_CGZ0015706
GPL19516_CGZ0015707
GPL19516_CGZ0015708
GPL19516_CGZ0015709
GPL21109_F12B6.2a
GPL21109_F12B6.2b
GPL21109_F12B6.2d
GPL3518_CE30273
GPL3518_CE30513
GPL8304_CE_WBGene00017398_A
GPL8304_CE_WBGene00017398_B
GPL8673_F12B6_2aP00768
GPL8673_F12B6_2aP01056
GPL8673_F12B6_2aP01411
GPL8673_F12B6_2bP00642
GPL8673_F12B6_2bP00930
GPL8673_F12B6_2bP01285
GPL8673_F12B6_2cP00056
GPL8673_F12B6_2cP00642
GPL8673_F12B6_2cP01285
GPL8673_F12B6_2dP00056
GPL8673_F12B6_2dP00768
GPL8673_F12B6_2dP01056
GPL9450_F12B6.2b
cea2.d.20140
Expression_cluster (157)
InteractionWBInteraction000139974
WBInteraction000219263
WBInteraction000234295
WBInteraction000289610
WBInteraction000334184
WBInteraction000371082
WBInteraction000468500
WBInteraction000468501
WBInteraction000581014
Map_infoMapIPosition-10.5915
PositivePositive_cloneF12B6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene