WormBase Tree Display for Gene: WBGene00016101

WBGene00016101 SMap: S_parent: Sequence: C25E10
  Identity: Version: 1
    Name: Sequence_name: C25E10.12
      Molecular_name: C25E10.12
        C25E10.12.1
        CE06874
      Other_name: CELE_C25E10.12 Accession_evidence: NDB BX284605
      Public_name: C25E10.12
    DB_info: Database: AceView gene 5J542
        WormQTL gene WBGene00016101
        WormFlux gene WBGene00016101
        NDB locus_tag CELE_C25E10.12
        Panther gene CAEEL|WormBase=WBGene00016101|UniProtKB=Q18161
          family PTHR12905
        NCBI gene 182896
        RefSeq protein NM_072948.5
        SwissProt UniProtAcc Q18161
        TREEFAM TREEFAM_ID TF314305
        UniProt_GCRP UniProtAcc Q18161
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:57 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (24)
    Strain: WBStrain00003554
    RNASeq_FPKM (74)
    GO_annotation: 00121785
    Ortholog: WBGene00038443 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00068598 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073466 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142495 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136199 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222632 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g785 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1067 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5553 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4580 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18199 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19670 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10291 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15853 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g13490 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g21403 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00509.g11684 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C25E10.12 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g16834 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00136.g5303 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19091 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017221 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00119 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g21468 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50234800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15156 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242948 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00280235 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00265265 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291534 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036028 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-030131-8903 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-050417-241 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:1180 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:1306 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1924265 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1308244 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
    Paralog: WBGene00011579 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019479 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: C25E10.12 encodes one of three C. elegans metallophoshopesterase that are related to human 239FB, which is encoded by a gene in the 11p13-p14 chromosomal region associated with various tumors and WAGR (Wilms' tumor, aniridia, genitourinary anomalies, and mental retardation) syndrome; large-scale expression studies suggest that C25E10.12 is expressed in a number of different tissues including the intestine, hypodermis, nervous system, and epithelial arcade cells. Paper_evidence: WBPaper00031006
            WBPaper00032352
            WBPaper00032353
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Nov 2008 00:00:00
      Automated_description: Predicted to enable hydrolase activity. Is an ortholog of human MPPED1 (metallophosphoesterase domain containing 1) and MPPED2 (metallophosphoesterase domain containing 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C25E10.12
    Corresponding_transcript: C25E10.12.1
    Other_sequence (43)
    Associated_feature: WBsf1000806
      WBsf1020127
      WBsf234170
  Experimental_info: RNAi_result: WBRNAi00041182 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5336
      Expr1012432
      Expr1036875
      Expr1145213
      Expr2001076
      Expr2019297
    Drives_construct: WBCnstr00004006
    Microarray_results: SMD_6C25E10.12
      SMD_C25E10.12
      187765_at
      A_12_P113021
      Aff_C25E10.12
      GPL13394_WBGene00016101
      GPL13914_C25E10.12
      GPL14144_C25E10.12_547-606_0.930_3_B
      GPL14144_C25E10.12_615-674_0.932_2_C
      GPL14144_C25E10.12_779-838_0.941_1_A
      GPL19516_CGZ0005889
      GPL21109_C25E10.12
      GPL3518_CE06874
      GPL8304_CE_WBGene00016101_A
      GPL8673_C25E10_12P00064
      GPL8673_C25E10_12P00340
      GPL8673_C25E10_12P00688
      GPL9450_C25E10.12
      cea2.i.33838
    Expression_cluster (135)
    Interaction: WBInteraction000183324
      WBInteraction000197118
      WBInteraction000570706
      WBInteraction000573819
      WBInteraction000574371
  Map_info: Positive: Positive_clone: C25E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 1.9158
  Reference: WBPaper00032352
    WBPaper00032354
    WBPaper00038491
    WBPaper00055090
  Method: Gene