WormBase Tree Display for Gene: WBGene00020281
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WBGene00020281 | SMap | S_parent | Sequence | T06A4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (4) | |||||||||
DB_info | Database | AceView | gene | 1B249 | |||||
WormQTL | gene | WBGene00020281 | |||||||
WormFlux | gene | WBGene00020281 | |||||||
NDB | locus_tag | CELE_T06A4.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020281|UniProtKB=H2L0K5 | |||||||
family | PTHR11705 | ||||||||
NCBI | gene | 171669 | |||||||
RefSeq | protein | NM_182009.5 | |||||||
NM_001392492.1 | |||||||||
TrEMBL | UniProtAcc | H2L0K5 | |||||||
Q9TZH1 | |||||||||
UniProt_GCRP | UniProtAcc | H2L0K5 | |||||||
OMIM | gene | 609562 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (102) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (65) | |||||||||
Paralog | WBGene00008521 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00011235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WormBase-Compara | |||||||||
WBGene00012168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00013895 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021213 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021645 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00020283 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00021984 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00004747 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Predicted to enable metallocarboxypeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in extracellular space. Human ortholog(s) of this gene implicated in several diseases, including Behcet's disease; familial febrile seizures 11; and familial temporal lobe epilepsy 5. Is an ortholog of human CPA6 (carboxypeptidase A6). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9351 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||
DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:1184 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:2228 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:9970 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:13241 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:0060752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
DOID:784 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2300) | ||||||
DOID:0111308 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17245) | ||||||
Molecular_info | Corresponding_CDS | T06A4.1a | |||||||
T06A4.1b | |||||||||
Corresponding_CDS_history | T06A4.1a:wp142 | ||||||||
T06A4.1a:wp265 | |||||||||
Corresponding_transcript | T06A4.1a.1 | ||||||||
T06A4.1a.2 | |||||||||
T06A4.1b.1 | |||||||||
Other_sequence (21) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00004146 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089150 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052612 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022402 | ||||||||
Expr1038832 | |||||||||
Expr1156218 | |||||||||
Expr2005917 | |||||||||
Expr2024133 | |||||||||
Drives_construct | WBCnstr00025243 | ||||||||
Construct_product | WBCnstr00025243 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (168) | |||||||||
Interaction | WBInteraction000043153 | ||||||||
WBInteraction000049192 | |||||||||
WBInteraction000049221 | |||||||||
WBInteraction000049223 | |||||||||
WBInteraction000049225 | |||||||||
WBInteraction000049241 | |||||||||
WBInteraction000049254 | |||||||||
WBInteraction000123327 | |||||||||
WBInteraction000123898 | |||||||||
WBInteraction000123899 | |||||||||
WBInteraction000123900 | |||||||||
WBInteraction000123901 | |||||||||
WBInteraction000232077 | |||||||||
WBInteraction000294473 | |||||||||
WBInteraction000424326 | |||||||||
Map_info | Positive | Positive_clone | T06A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -18.2648 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |