WormBase Tree Display for Gene: WBGene00019767

WBGene00019767 SMap: S_parent: Sequence: M04F3
  Identity: Version: 2
    Name: CGC_name: rpa-2
      Sequence_name: M04F3.1
      Molecular_name: M04F3.1
        M04F3.1.1
        CE12414
      Other_name: CeRPA Paper_evidence: WBPaper00025014
            WBPaper00031956
        CeRPA32 Paper_evidence: WBPaper00040684
        CELE_M04F3.1 Accession_evidence: NDB BX284601
      Public_name: rpa-2
    DB_info: Database: AceView gene 1F339
        WormQTL gene WBGene00019767
        WormFlux gene WBGene00019767
        NDB locus_tag CELE_M04F3.1
        Panther gene CAEEL|WormBase=WBGene00019767|UniProtKB=Q95Y97
          family PTHR13989
        NCBI gene 172092
        RefSeq protein NM_059045.8
        TREEFAM TREEFAM_ID TF352968
        TrEMBL UniProtAcc Q95Y97
        UniProt_GCRP UniProtAcc Q95Y97
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 07 Feb 2007 08:58:58 WBPerson2970 Name_change: CGC_name: rpa-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rpa
    Allele (14)
    Strain: WBStrain00035259
      WBStrain00036377
      WBStrain00034799
      WBStrain00051041
      WBStrain00051036
      WBStrain00051034
      WBStrain00051035
    RNASeq_FPKM (74)
    GO_annotation (23)
    Ortholog (22)
    Paralog: WBGene00019079 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: rpa-2 encodes the C. elegans homolog of the medium subunit of replication protein A (RPA); by homology RPA-2 is predicted to function in several DNA metabolic processes, including recombination, repair, and replication, as well as cell cycle and DNA damage checkpoints; RPA-2 physically interacts with RPA-1, the RPA large subunit, in vivo. Paper_evidence: WBPaper00025138
          Curator_confirmed: WBPerson1843
          Date_last_updated: 05 Aug 2012 00:00:00
      Automated_description: Enables enzyme binding activity. Predicted to be involved in DNA replication; double-strand break repair via homologous recombination; and nucleotide-excision repair. Predicted to be located in chromosome, telomeric region and site of double-strand break. Predicted to be part of DNA replication factor A complex. Expressed in pharyngeal neurons and seam cell. Is an ortholog of human RPA2 (replication protein A2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M04F3.1
    Corresponding_transcript: M04F3.1.1
    Other_sequence: CGC00518_1
      CRC01239_1
      CR09300
      CR09179
      CBC03124_1
      CJC02916_1
      CR02657
    Associated_feature (8)
  Experimental_info: RNAi_result (18)
    Expr_pattern: Chronogram2029
      Expr7623
      Expr1026249
      Expr1038551
      Expr1154609
      Expr1200320
      Expr2015415
      Expr2033650
    Drives_construct: WBCnstr00001067
      WBCnstr00012768
      WBCnstr00025609
    Construct_product: WBCnstr00025609
    Microarray_results (21)
    Expression_cluster (154)
    Interaction: WBInteraction000028512
      WBInteraction000031170
      WBInteraction000031436
      WBInteraction000032465
      WBInteraction000032477
      WBInteraction000035191
      WBInteraction000035830
      WBInteraction000036307
      WBInteraction000036502
      WBInteraction000037706
      WBInteraction000037708
      WBInteraction000038208
      WBInteraction000038423
      WBInteraction000038509
      WBInteraction000038523
      WBInteraction000039889
      WBInteraction000039908
      WBInteraction000039909
      WBInteraction000039910
      WBInteraction000039911
      WBInteraction000040482
      WBInteraction000041535
      WBInteraction000042748
      WBInteraction000043115
      WBInteraction000043500
      WBInteraction000043501
      WBInteraction000044031
      WBInteraction000044037
      WBInteraction000044043
      WBInteraction000044049
      WBInteraction000044055
      WBInteraction000044061
      WBInteraction000044077
      WBInteraction000044085
      WBInteraction000044091
      WBInteraction000044102
      WBInteraction000044201
      WBInteraction000044403
      WBInteraction000045154
      WBInteraction000045465
      WBInteraction000045613
      WBInteraction000045706
      WBInteraction000046396
      WBInteraction000046624
      WBInteraction000046627
      WBInteraction000046633
      WBInteraction000046636
      WBInteraction000046784
      WBInteraction000046933
      WBInteraction000047203
      WBInteraction000047218
      WBInteraction000047219
      WBInteraction000047220
      WBInteraction000047671
      WBInteraction000048156
      WBInteraction000052019
      WBInteraction000105719
      WBInteraction000109390
      WBInteraction000124789
      WBInteraction000125180
      WBInteraction000125183
      WBInteraction000127187
      WBInteraction000127737
      WBInteraction000127959
      WBInteraction000128371
      WBInteraction000128436
      WBInteraction000128588
      WBInteraction000128594
      WBInteraction000128763
      WBInteraction000128839
      WBInteraction000128847
      WBInteraction000128854
      WBInteraction000131020
      WBInteraction000131111
      WBInteraction000131125
      WBInteraction000131201
      WBInteraction000131370
      WBInteraction000132529
      WBInteraction000132595
      WBInteraction000132752
      WBInteraction000132753
      WBInteraction000132754
      WBInteraction000132755
      WBInteraction000132756
      WBInteraction000132757
      WBInteraction000132758
      WBInteraction000132759
      WBInteraction000132760
      WBInteraction000132761
      WBInteraction000132762
      WBInteraction000132763
      WBInteraction000132764
      WBInteraction000132765
      WBInteraction000132766
      WBInteraction000132767
      WBInteraction000132768
      WBInteraction000132769
      WBInteraction000132770
      WBInteraction000132771
      WBInteraction000132772
      WBInteraction000137279
      WBInteraction000139178
      WBInteraction000153566
      WBInteraction000154134
      WBInteraction000155462
      WBInteraction000155573
      WBInteraction000156354
      WBInteraction000156355
      WBInteraction000156356
      WBInteraction000170098
      WBInteraction000174491
      WBInteraction000206061
      WBInteraction000264926
      WBInteraction000275419
      WBInteraction000291845
      WBInteraction000310516
      WBInteraction000340394
      WBInteraction000360340
      WBInteraction000384261
      WBInteraction000384738
      WBInteraction000385564
      WBInteraction000388968
      WBInteraction000389561
      WBInteraction000401691
      WBInteraction000402206
      WBInteraction000403226
      WBInteraction000403315
      WBInteraction000410030
      WBInteraction000418719
      WBInteraction000424775
      WBInteraction000435384
      WBInteraction000441062
      WBInteraction000450418
      WBInteraction000453532
      WBInteraction000457390
      WBInteraction000457959
      WBInteraction000458046
      WBInteraction000500779
      WBInteraction000507628
      WBInteraction000507629
      WBInteraction000507630
      WBInteraction000507631
      WBInteraction000507632
      WBInteraction000507633
      WBInteraction000507634
      WBInteraction000507635
      WBInteraction000507636
      WBInteraction000507637
      WBInteraction000507638
      WBInteraction000507639
      WBInteraction000507640
      WBInteraction000507641
      WBInteraction000507642
      WBInteraction000507643
      WBInteraction000507644
      WBInteraction000507645
      WBInteraction000507646
      WBInteraction000507647
      WBInteraction000507648
      WBInteraction000507649
      WBInteraction000507650
      WBInteraction000507651
      WBInteraction000507652
      WBInteraction000507653
      WBInteraction000507654
      WBInteraction000507655
      WBInteraction000507656
      WBInteraction000509881
      WBInteraction000509882
      WBInteraction000509883
      WBInteraction000509884
      WBInteraction000509885
      WBInteraction000509886
      WBInteraction000509887
      WBInteraction000509888
      WBInteraction000509889
      WBInteraction000509890
      WBInteraction000509891
      WBInteraction000509892
      WBInteraction000509893
      WBInteraction000509894
      WBInteraction000509895
      WBInteraction000509896
      WBInteraction000509897
      WBInteraction000509898
      WBInteraction000509899
      WBInteraction000509900
      WBInteraction000509901
      WBInteraction000509902
      WBInteraction000509903
      WBInteraction000509904
      WBInteraction000509905
      WBInteraction000509907
      WBInteraction000509908
      WBInteraction000509910
      WBInteraction000509911
      WBInteraction000509912
      WBInteraction000509913
      WBInteraction000509914
      WBInteraction000509915
      WBInteraction000509916
      WBInteraction000509917
      WBInteraction000512134
      WBInteraction000512135
      WBInteraction000512144
      WBInteraction000512145
      WBInteraction000512146
      WBInteraction000512147
      WBInteraction000512148
      WBInteraction000512149
      WBInteraction000512150
      WBInteraction000512151
      WBInteraction000512152
      WBInteraction000512153
      WBInteraction000512154
      WBInteraction000512155
      WBInteraction000512156
      WBInteraction000512157
      WBInteraction000512158
      WBInteraction000512159
      WBInteraction000512160
      WBInteraction000512161
      WBInteraction000512162
      WBInteraction000512163
      WBInteraction000512164
      WBInteraction000512165
      WBInteraction000512166
      WBInteraction000512167
      WBInteraction000512168
      WBInteraction000512169
      WBInteraction000512170
      WBInteraction000512171
      WBInteraction000514404
      WBInteraction000514405
      WBInteraction000514407
      WBInteraction000514408
      WBInteraction000514409
      WBInteraction000522618
      WBInteraction000522620
      WBInteraction000542766
      WBInteraction000543352
      WBInteraction000547849
      WBInteraction000548079
      WBInteraction000548465
      WBInteraction000551496
      WBInteraction000555849
      WBInteraction000557790
      WBInteraction000560155
      WBInteraction000564679
      WBInteraction000567245
      WBInteraction000567501
      WBInteraction000569239
      WBInteraction000570558
      WBInteraction000571382
      WBInteraction000571383
      WBInteraction000571386
      WBInteraction000571388
      WBInteraction000571389
      WBInteraction000571390
      WBInteraction000571392
      WBInteraction000573887
      WBInteraction000574734
      WBInteraction000578132
      WBInteraction000581115
      WBInteraction000581917
      WBInteraction000585444
  Map_info: Map: I Position: -0.738345 Error: 0.002057
    Positive: Positive_clone: M04F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene