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WormBase Tree Display for Gene: WBGene00002016

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Name Class

WBGene00002016SMapS_parentSequenceY46H3A
IdentityVersion1
NameCGC_namehsp-16.2Person_evidenceWBPerson36
Sequence_nameY46H3A.3
Molecular_name (6)
Other_namehsp-16
hsp16-2Paper_evidenceWBPaper00035961
CELE_Y46H3A.3Accession_evidenceNDBBX284605
Public_namehsp-16.2
DB_infoDatabaseAceViewgene5C282
WormQTLgeneWBGene00002016
WormFluxgeneWBGene00002016
NDBlocus_tagCELE_Y46H3A.3
PanthergeneCAEEL|WormBase=WBGene00002016|UniProtKB=P06582
familyPTHR45640
NCBIgene178659
RefSeqproteinNM_001392482.1
NM_001307736.3
SwissProtUniProtAccP06582
TrEMBLUniProtAccV6CLQ2
UniProt_GCRPUniProtAccP06582
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhsp
Allele (16)
Strain (36)
In_clusterHSP16B
RNASeq_FPKM (74)
GO_annotation00038912
00038913
00038914
00038915
00038916
00038917
00038918
00038919
00038920
00105435
Ortholog (92)
Paralog (17)
Structured_descriptionConcise_descriptionhsp-16.2 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins; hsp-16.2 expression, strongest in intestine and pharynx, is induced in response to heat shock or other environmental stresses; HSP-16.2 has been shown to interact with intracellular human beta amyloid peptide, a primary component of the extracellular plaques found in Alzheimer's disease; HSP-16.2 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating.Paper_evidenceWBPaper00001187
WBPaper00001497
WBPaper00002665
WBPaper00003787
WBPaper00004424
WBPaper00005371
WBPaper00013029
WBPaper00013239
WBPaper00013280
Curator_confirmedWBPerson1843
Date_last_updated05 Nov 2004 00:00:00
Automated_descriptionPredicted to enable unfolded protein binding activity. Involved in response to heat. Located in cytoplasm. Expressed in several structures, including coelomocyte; enteric muscle; gonad; somatic nervous system; and spermatid.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY46H3A.3a
Y46H3A.3b
Corresponding_transcriptY46H3A.3a.1
Y46H3A.3b.1
Other_sequence (86)
Associated_featureWBsf652481
WBsf652482
WBsf919559
WBsf919560
WBsf919561
WBsf919562
WBsf233356
WBsf233357
WBsf233358
Experimental_infoRNAi_resultWBRNAi00020672Inferred_automaticallyRNAi_primary
WBRNAi00027604Inferred_automaticallyRNAi_primary
WBRNAi00076795Inferred_automaticallyRNAi_primary
WBRNAi00063187Inferred_automaticallyRNAi_primary
WBRNAi00113926Inferred_automaticallyRNAi_primary
WBRNAi00063652Inferred_automaticallyRNAi_primary
WBRNAi00056700Inferred_automaticallyRNAi_primary
WBRNAi00070128Inferred_automaticallyRNAi_primary
WBRNAi00106382Inferred_automaticallyRNAi_primary
WBRNAi00113923Inferred_automaticallyRNAi_primary
Expr_pattern (12)
Drives_construct (233)
Construct_productWBCnstr00004969
WBCnstr00010254
WBCnstr00021901
WBCnstr00036520
WBCnstr00042208
AntibodyWBAntibody00000050
WBAntibody00001324
WBAntibody00001797
WBAntibody00001844
WBAntibody00001859
Microarray_results (16)
Expression_cluster (393)
InteractionWBInteraction000005532
WBInteraction000005555
WBInteraction000005683
WBInteraction000005859
WBInteraction000134059
WBInteraction000134069
WBInteraction000134093
WBInteraction000135543
WBInteraction000135561
WBInteraction000136795
WBInteraction000136798
WBInteraction000136815
WBInteraction000136858
WBInteraction000136866
WBInteraction000136881
WBInteraction000136896
WBInteraction000136909
WBInteraction000136922
WBInteraction000138060
WBInteraction000139103
WBInteraction000140925
WBInteraction000145323
WBInteraction000145335
WBInteraction000149196
WBInteraction000150185
WBInteraction000214675
WBInteraction000235510
WBInteraction000344205
WBInteraction000356629
WBInteraction000416420
WBInteraction000425474
WBInteraction000466735
WBInteraction000501468
WBInteraction000501583
WBInteraction000501584
WBInteraction000501585
WBInteraction000501586
WBInteraction000501789
WBInteraction000501790
WBInteraction000501791
WBInteraction000501837
WBInteraction000502027
WBInteraction000502965
WBInteraction000503764
WBInteraction000503900
WBInteraction000504004
WBInteraction000504255
WBInteraction000504418
WBInteraction000504495
WBInteraction000504844
WBInteraction000504911
WBInteraction000505051
WBInteraction000505167
WBInteraction000518865
WBInteraction000519451
WBInteraction000519480
WBInteraction000519481
WBInteraction000519502
WBInteraction000519503
WBInteraction000519522
WBInteraction000519536
WBInteraction000519554
WBInteraction000519555
WBInteraction000519556
WBInteraction000519557
WBInteraction000519558
WBInteraction000519897
WBInteraction000519898
WBInteraction000520021
WBInteraction000520875
WBInteraction000520877
WBInteraction000521014
WBInteraction000521311
WBInteraction000524352
WBInteraction000535436
WBInteraction000535437
WBInteraction000536210
WBInteraction000536811
WBInteraction000536812
WBInteraction000536814
WBInteraction000536815
WBInteraction000536843
WBInteraction000536845
WBInteraction000536870
WBInteraction000536872
WBInteraction000536973
WBInteraction000536974
WBInteraction000537246
WBInteraction000537247
WBInteraction000537248
WBInteraction000537249
WBInteraction000537250
WBInteraction000537251
WBInteraction000537252
WBInteraction000537253
WBInteraction000537254
WBInteraction000537255
WBInteraction000537256
WBInteraction000537257
WBInteraction000537258
WBInteraction000537259
WBInteraction000537260
WBInteraction000537261
WBInteraction000537262
WBInteraction000537263
WBInteraction000537264
WBInteraction000537265
WBInteraction000537266
WBInteraction000537267
WBInteraction000537268
WBInteraction000537269
WBInteraction000537270
WBInteraction000537271
WBInteraction000537272
WBInteraction000537273
WBInteraction000537274
WBInteraction000537275
WBInteraction000537276
WBInteraction000537277
WBInteraction000537278
WBInteraction000537581
WBInteraction000541228
WBInteraction000541469
WBInteraction000541472
WBInteraction000541474
WBInteraction000541477
WBInteraction000541478
WBInteraction000541481
WBInteraction000541486
WBInteraction000541489
WBInteraction000541492
WBInteraction000541494
WBInteraction000541497
WBInteraction000542048
WBInteraction000542049
WBInteraction000542050
WBInteraction000542051
WBInteraction000542052
WBInteraction000542053
WBInteraction000542054
WBInteraction000542055
WBInteraction000542056
WBInteraction000542057
WBInteraction000542058
WBInteraction000542059
WBInteraction000542060
WBInteraction000542130
WBInteraction000542131
WBInteraction000542132
WBInteraction000542133
WBInteraction000542134
WBInteraction000542136
WBInteraction000542137
WBInteraction000542138
WBInteraction000542139
WBInteraction000542140
WBInteraction000542141
WBInteraction000542165
WBInteraction000542405
WBInteraction000542500
WBInteraction000542501
WBInteraction000542523
WBInteraction000542581
WBInteraction000542582
WBInteraction000542583
WBInteraction000542584
WBInteraction000542585
WBInteraction000542591
WBInteraction000542592
WBInteraction000542593
WBInteraction000542594
WBInteraction000542595
WBInteraction000542596
WBInteraction000542597
WBInteraction000542598
WBInteraction000542600
WBInteraction000542601
WBInteraction000542603
WBInteraction000542604
WBInteraction000542605
WBInteraction000542606
WBInteraction000542607
WBInteraction000542608
WBInteraction000542609
WBInteraction000542610
WBInteraction000542611
WBInteraction000542612
WBInteraction000542613
WBInteraction000542614
WBInteraction000542615
WBInteraction000542616
WBInteraction000542617
WBInteraction000542618
WBInteraction000542619
WBInteraction000542620
WBInteraction000542621
WBInteraction000542656
WBInteraction000542778
WBInteraction000542779
WBInteraction000542780
WBInteraction000542792
WBInteraction000548808
WBInteraction000554048
WBInteraction000554602
WBInteraction000554603
WBInteraction000554604
WBInteraction000554605
WBInteraction000554606
WBInteraction000554607
WBInteraction000554608
WBInteraction000554609
WBInteraction000554610
WBInteraction000554611
WBInteraction000554612
WBInteraction000554613
WBInteraction000554614
WBInteraction000554615
WBInteraction000554616
WBInteraction000554617
WBInteraction000554618
WBInteraction000554619
WBInteraction000554620
WBInteraction000554621
WBInteraction000554622
WBInteraction000554623
WBInteraction000554624
WBInteraction000554625
WBInteraction000554626
WBInteraction000554627
WBInteraction000554628
WBInteraction000554629
WBInteraction000554630
WBInteraction000554631
WBInteraction000554632
WBInteraction000554633
WBInteraction000554634
WBInteraction000554635
WBInteraction000554636
WBInteraction000554637
WBInteraction000554638
WBInteraction000554639
WBInteraction000554640
WBInteraction000554641
WBInteraction000554642
WBInteraction000554643
WBInteraction000554644
WBInteraction000554645
WBInteraction000554646
WBInteraction000554647
WBInteraction000554648
WBInteraction000554649
WBInteraction000554650
WBInteraction000554651
WBInteraction000554652
WBInteraction000554653
WBInteraction000554654
WBInteraction000554655
WBInteraction000554656
WBInteraction000554657
WBInteraction000554658
WBInteraction000554659
WBInteraction000554660
WBInteraction000554661
WBInteraction000554662
WBInteraction000554663
WBInteraction000554664
WBInteraction000554665
WBInteraction000554666
WBInteraction000554667
WBInteraction000554668
WBInteraction000554669
WBInteraction000554670
WBInteraction000554671
WBInteraction000554672
WBInteraction000554673
WBInteraction000554674
WBInteraction000554675
WBInteraction000554676
WBInteraction000554677
WBInteraction000554678
WBInteraction000554679
WBInteraction000554680
WBInteraction000554681
WBInteraction000554682
WBInteraction000554683
WBInteraction000554684
WBInteraction000554685
WBInteraction000554686
WBInteraction000554687
WBInteraction000554688
WBInteraction000554689
WBInteraction000554690
WBInteraction000554691
WBInteraction000555460
WBInteraction000557559
WBInteraction000557727
WBInteraction000557728
WBInteraction000557814
WBInteraction000557939
WBInteraction000557940
WBInteraction000557941
WBInteraction000557942
WBInteraction000558464
WBInteraction000571260
WBInteraction000571261
WBInteraction000571530
WBInteraction000571532
WBInteraction000571537
WBInteraction000571543
WBInteraction000571546
WBInteraction000571550
WBInteraction000571684
WBInteraction000577009
WBInteraction000580076
WBInteraction000582367
WBProcessWBbiopr:00000050
Map_infoMapVPosition-17.5804Error0.043798
PositivePositive_cloneY46H3AInferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4418
5335
Pseudo_map_position
Reference (244)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene