Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00013880

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00013880SMapS_parentSequenceZC410
IdentityVersion2
NameCGC_namemppb-1Paper_evidenceWBPaper00027699
Sequence_nameZC410.2
Molecular_nameZC410.2
ZC410.2.1
CE35701
Other_nameCELE_ZC410.2Accession_evidenceNDBBX284604
Public_namemppb-1
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:55WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Jul 2006 09:59:16WBPerson2970Name_changeCGC_namemppb-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmppb
Allele (29)
RNASeq_FPKM (74)
GO_annotation (16)
Ortholog (48)
ParalogWBGene00022159Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018963Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00011679Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00012158Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013492Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015360Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015481Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00018426Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020757Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionContributes to metalloendopeptidase activity. Involved in proteolysis. Part of mitochondrial processing peptidase complex. Human ortholog(s) of this gene implicated in Alzheimer's disease and multiple mitochondrial dysfunctions syndrome 6. Is an ortholog of human PMPCB (peptidase, mitochondrial processing subunit beta).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:10652Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:12585)
DOID:0070332Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:9119)
Molecular_infoCorresponding_CDSZC410.2
Corresponding_CDS_historyZC410.2:wp109
Corresponding_transcriptZC410.2.1
Other_sequenceDviv_isotig22891
EX556850.1
Acan_isotig07618
Oden_isotig06906
TSC02472_1
HSC01228_1
TSC12041_1
GO249977.1
Oden_isotig06904
Oden_isotig06915
JI473935.1
FC542707.1
HGC08043_1
ACC00408_1
JO468162.1
SSC02077_1
Oden_isotig06912
AW980237.1
Oden_isotig06911
SR02445
FE918695.1
ASC03951_1
AS01785
ES570305.1
Oden_isotig06909
Oden_isotig06905
TS00872
OVC05682_1
FE913124.1
EX547333.1
Oden_isotig06914
PPC20971_1
Tcir_isotig16334
FC541156.1
EX557427.1
Oden_isotig06908
FE919388.1
JI171388.1
CBC04830_1
BMC00434_1
HG04287
HG09898
Oden_isotig06913
ASC02137_1
SS00511
FC815573.1
Hbac_isotig01949
EX500078.1
SRC01633_1
ES565101.1
CRC10129_1
AS07875
ACC29793_1
BG809103.1
FK800956.1
Oden_isotig06910
Oden_isotig06907
HS00901
Associated_featureWBsf655035
WBsf228779
Experimental_infoRNAi_resultWBRNAi00111775Inferred_automaticallyRNAi_primary
WBRNAi00021682Inferred_automaticallyRNAi_primary
WBRNAi00102818Inferred_automaticallyRNAi_primary
WBRNAi00058893Inferred_automaticallyRNAi_primary
Expr_patternExpr1010913
Expr1036210
Expr1162329
Expr2013670
Expr2031904
Drives_constructWBCnstr00029479
Construct_productWBCnstr00029479
AntibodyWBAntibody00001111
Microarray_results (20)
Expression_cluster (111)
InteractionWBInteraction000037869
WBInteraction000042758
WBInteraction000042765
WBInteraction000042814
WBInteraction000047717
WBInteraction000101512
WBInteraction000109073
WBInteraction000109074
WBInteraction000109075
WBInteraction000111768
WBInteraction000125731
WBInteraction000125732
WBInteraction000142077
WBInteraction000145606
WBInteraction000148345
WBInteraction000153359
WBInteraction000153389
WBInteraction000153414
WBInteraction000153444
WBInteraction000153480
WBInteraction000153507
WBInteraction000153527
WBInteraction000153951
WBInteraction000154116
WBInteraction000154192
WBInteraction000154221
WBInteraction000155148
WBInteraction000155159
WBInteraction000155171
WBInteraction000155228
WBInteraction000155296
WBInteraction000155441
WBInteraction000155475
WBInteraction000155490
WBInteraction000155561
WBInteraction000155586
WBInteraction000155607
WBInteraction000155670
WBInteraction000155754
WBInteraction000155758
WBInteraction000155761
WBInteraction000155788
WBInteraction000155793
WBInteraction000155797
WBInteraction000155801
WBInteraction000155811
WBInteraction000155868
WBInteraction000155911
WBInteraction000155946
WBInteraction000156000
WBInteraction000156029
WBInteraction000156206
WBInteraction000156311
WBInteraction000156338
WBInteraction000156403
WBInteraction000156412
WBInteraction000156483
WBInteraction000156487
WBInteraction000156491
WBInteraction000156495
WBInteraction000156500
WBInteraction000156503
WBInteraction000156508
WBInteraction000156511
WBInteraction000157405
WBInteraction000167956
WBInteraction000170157
WBInteraction000175217
WBInteraction000191358
WBInteraction000195471
WBInteraction000204494
WBInteraction000204495
WBInteraction000215066
WBInteraction000241654
WBInteraction000244738
WBInteraction000251040
WBInteraction000255348
WBInteraction000256231
WBInteraction000259862
WBInteraction000260682
WBInteraction000263304
WBInteraction000264382
WBInteraction000269125
WBInteraction000276793
WBInteraction000285728
WBInteraction000285849
WBInteraction000287016
WBInteraction000290036
WBInteraction000290243
WBInteraction000292022
WBInteraction000293302
WBInteraction000306894
WBInteraction000307908
WBInteraction000314663
WBInteraction000317641
WBInteraction000320042
WBInteraction000320340
WBInteraction000321987
WBInteraction000328451
WBInteraction000330039
WBInteraction000330040
WBInteraction000340409
WBInteraction000349300
WBInteraction000350270
WBInteraction000359529
WBInteraction000361393
WBInteraction000365434
WBInteraction000374380
WBInteraction000380955
WBInteraction000385521
WBInteraction000390945
WBInteraction000404332
WBInteraction000416133
WBInteraction000419697
WBInteraction000421431
WBInteraction000424204
WBInteraction000434125
WBInteraction000452152
WBInteraction000459325
WBInteraction000464248
WBInteraction000465330
WBInteraction000470465
WBInteraction000525085
WBInteraction000555817
WBInteraction000579748
WBInteraction000583345
Map_infoMapIVPosition4.02417Error0.001342
PositivePositive_cloneZC410Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027699
WBPaper00030701
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene