WormBase Tree Display for Gene: WBGene00020917

WBGene00020917 SMap: S_parent: Sequence: W01B11
  Identity: Version: 1
    Name: Sequence_name: W01B11.6
      Molecular_name: W01B11.6
        W01B11.6.1
        CE26952
      Other_name: CELE_W01B11.6 Accession_evidence: NDB BX284601
      Public_name: W01B11.6
    DB_info: Database: AceView gene 1D862
        WormQTL gene WBGene00020917
        WormFlux gene WBGene00020917
        NDB locus_tag CELE_W01B11.6
        Panther gene CAEEL|WormBase=WBGene00020917|UniProtKB=O45017
          family PTHR10438
        NCBI gene 171903
        RefSeq protein NM_058738.7
        TrEMBL UniProtAcc O45017
        UniProt_GCRP UniProtAcc O45017
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (31)
    RNASeq_FPKM (74)
    Ortholog: WBGene00057670 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00122159 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00056421 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00123140 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00073211 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00035341 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00056420 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00136640 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141214 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00160914 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00216497 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00153607 Caenorhabditis brenneri From_analysis: Inparanoid_8
      CBOVI.g10220 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g17685 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g3343 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1791 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8371 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9590 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10971 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g24881 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g23520 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-W01B11.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6806 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00181.g6456 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13913 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002103 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10174000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g489 Caenorhabditis elegans From_analysis: WormBase-Compara
      HGNC:16470 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      HGNC:31454 Homo sapiens From_analysis: EnsEMBL-Compara
            Panther
      MGI:1914652 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      MGI:2389312 Mus musculus From_analysis: EnsEMBL-Compara
            Panther
      RGD:1359251 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
      RGD:1303121 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Panther
    Paralog: WBGene00007099 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00015062 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021548 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021826 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00021933 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including AIZ; coelomocyte; germline precursor cell; head mesodermal cell; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray; proteomic; and RNA-seq studies. Is affected by twenty-five chemicals including rotenone; 4-bromodiphenyl ether; and levamisole based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in male infertility. Human TXNDC2 enables thioredoxin-disulfide reductase (NADP) activity. Is predicted to encode a protein with the following domains: Thioredoxin-like superfamily; Thioredoxin domain; and Thioredoxin. Is an ortholog of human TXNDC2 (thioredoxin domain containing 2) and TXNDC8 (thioredoxin domain containing 8). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:12336 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:31454)
  Molecular_info: Corresponding_CDS: W01B11.6
    Corresponding_CDS_history: W01B11.6b:wp112
    Corresponding_transcript: W01B11.6.1
    Corresponding_transcript_history: W01B11.6b:wp251
    Associated_feature: WBsf664026
      WBsf219119
  Experimental_info: RNAi_result (3)
    Expr_pattern: Expr1018113
      Expr1158048
      Expr2006657
      Expr2024874
    Microarray_results (24)
    Expression_cluster (212)
    Interaction: WBInteraction000240358
      WBInteraction000259629
      WBInteraction000268191
      WBInteraction000271114
      WBInteraction000277227
      WBInteraction000293790
      WBInteraction000294042
      WBInteraction000305484
      WBInteraction000312111
      WBInteraction000315072
      WBInteraction000317831
      WBInteraction000324375
      WBInteraction000327006
      WBInteraction000327627
      WBInteraction000328910
      WBInteraction000329259
      WBInteraction000332719
      WBInteraction000338013
      WBInteraction000339431
      WBInteraction000342330
      WBInteraction000343161
      WBInteraction000345432
      WBInteraction000346801
      WBInteraction000347289
      WBInteraction000348930
      WBInteraction000355337
      WBInteraction000358545
      WBInteraction000361274
      WBInteraction000362657
      WBInteraction000365655
      WBInteraction000365968
      WBInteraction000371386
      WBInteraction000377133
      WBInteraction000396627
      WBInteraction000399281
      WBInteraction000407259
      WBInteraction000411962
      WBInteraction000415807
      WBInteraction000421836
      WBInteraction000423220
      WBInteraction000423987
      WBInteraction000431025
      WBInteraction000432444
      WBInteraction000433227
      WBInteraction000439259
      WBInteraction000440001
      WBInteraction000441149
      WBInteraction000456661
      WBInteraction000457545
      WBInteraction000460992
      WBInteraction000472591
      WBInteraction000472895
      WBInteraction000504262
  Map_info: Positive: Positive_clone: W01B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I -3.92076
  Reference: WBPaper00035663
    WBPaper00064898
    WBPaper00065331
  Method: Gene