WormBase Tree Display for Gene: WBGene00020391
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| WBGene00020391 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cct-7 | Person_evidence | WBPerson3663 | |||||
| Sequence_name | T10B5.5 | ||||||||
| Molecular_name | T10B5.5a | ||||||||
| T10B5.5a.1 | |||||||||
| CE28255 | |||||||||
| T10B5.5b | |||||||||
| CE33316 | |||||||||
| T10B5.5b.1 | |||||||||
| Other_name | CELE_T10B5.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | cct-7 | ||||||||
| DB_info | Database | AceView | gene | 5C353 | |||||
| WormQTL | gene | WBGene00020391 | |||||||
| WormFlux | gene | WBGene00020391 | |||||||
| NDB | locus_tag | CELE_T10B5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020391|UniProtKB=Q9TZS5 | |||||||
| family | PTHR11353 | ||||||||
| NCBI | gene | 178670 | |||||||
| RefSeq | protein | NM_182379.5 | |||||||
| NM_071121.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF105641 | |||||||
| TrEMBL | UniProtAcc | Q86S29 | |||||||
| Q9TZS5 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9TZS5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Jan 2008 09:55:22 | WBPerson2970 | Name_change | CGC_name | cct-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cct | ||||||||
| Allele (47) | |||||||||
| Strain | WBStrain00002184 | ||||||||
| WBStrain00049376 | |||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5560 | ||||||||
| Ortholog (40) | |||||||||
| Paralog | WBGene00000377 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00000378 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000379 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000380 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000381 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00018782 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021934 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00002025 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00004089 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | cct-7 encodes a putative eta subunit of the eukaryotic cytosolic ('T complex') chaperonin, orthologous to human CCT7 (OMIM:605140); CCT-7 is expressed in most, if not all, tissues; in mass RNAi assays, CCT-7 is required for normal transgene repression and subcellular localization, embryonic and larval viability, fertility, vulval development, and normal locomotion. | Paper_evidence | WBPaper00005654 | |||||
| WBPaper00006395 | |||||||||
| WBPaper00006510 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| WBPaper00028383 | |||||||||
| WBPaper00030965 | |||||||||
| WBPaper00031309 | |||||||||
| WBPaper00031362 | |||||||||
| WBPaper00031363 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 14 Jan 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable unfolded protein binding activity. Predicted to be involved in protein folding. Predicted to be located in cytoplasm. Predicted to be part of chaperonin-containing T-complex. Expressed in anchor cell; head; non-striated muscle; and tail. Is an ortholog of human CCT7 (chaperonin containing TCP1 subunit 7). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10B5.5a | |||||||
| T10B5.5b | |||||||||
| Corresponding_transcript | T10B5.5a.1 | ||||||||
| T10B5.5b.1 | |||||||||
| Other_sequence (151) | |||||||||
| Associated_feature | WBsf646685 | ||||||||
| WBsf646686 | |||||||||
| WBsf661150 | |||||||||
| WBsf981898 | |||||||||
| WBsf231447 | |||||||||
| WBsf231448 | |||||||||
| WBsf231449 | |||||||||
| WBsf231450 | |||||||||
| WBsf231451 | |||||||||
| WBsf231452 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern (8) | |||||||||
| Drives_construct | WBCnstr00002938 | ||||||||
| WBCnstr00006157 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (175) | |||||||||
| Interaction (75) | |||||||||
| Anatomy_function | WBbtf0415 | ||||||||
| Map_info | Map | V | Position | -16.8887 | Error | 0.023221 | |||
| Positive | Positive_clone | T10B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030965 | ||||||||
| WBPaper00035228 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045625 | |||||||||
| WBPaper00050564 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061536 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
