WormBase Tree Display for Gene: WBGene00002991
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| WBGene00002991 | SMap | S_parent | Sequence | F17E5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | lin-2 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F17E5.1 | ||||||||
| Molecular_name | F17E5.1a | ||||||||
| F17E5.1a.1 | |||||||||
| CE27131 | |||||||||
| F17E5.1b | |||||||||
| CE27132 | |||||||||
| F17E5.1b.1 | |||||||||
| Other_name | CELE_F17E5.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | lin-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:30 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lin | ||||||||
| Reference_allele | WBVar00143908 | ||||||||
| Allele (248) | |||||||||
| Possibly_affected_by | WBVar02157232 | ||||||||
| Legacy_information | e1309 : adult hermaphrodite vulvaless (penetrance 93%); ES2 (adult)/ ES1 (larvae); HME2; adult male wildtype ME3. NA13 (e1453amber (non-null lower penetrance than e1309 50% vulvaless) n105ts (penetrance 24% at 15x 90% at 25x) n768 (weak allele multiple vulval protrusions penetrance 21%) etc.). | ||||||||
| See also e1309, e1424, e1437, e1453, n105, n167, n305, n380, n670, n674, n768, n1052, n1297, n1298 | |||||||||
| [C.elegansII] e1309 : adult hermaphrodite vulvaless (penetrance 93%); ES2 (adult)/ ES1 (larvae); HME2; adult male wildtype ME3. NA13: e1453amb (non-null, lower penetrance than e1309, 50% vulvaless), n105ts (penetrance 24% at 15C, 90% at 25C) n768 (weak allele multiple vulval protrusions penetrance 21%), n397 (deletes most of gene), etc. Cloned: encodes predicted protein with PDZ domain,similarity to guanylate kinase, Drosophila discs large. Mutants delocalize LET-23. [Ferguson et al. 1985; SD; MT] | |||||||||
| Strain (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (26) | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00006467 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016841 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021914 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description (2) | |||||||||
| Disease_info (2) | |||||||||
| Models_disease_asserted | WBDOannot00000474 | ||||||||
| Molecular_info | Corresponding_CDS | F17E5.1a | |||||||
| F17E5.1b | |||||||||
| Corresponding_CDS_history | F17E5.1a:wp47 | ||||||||
| F17E5.1b:wp47 | |||||||||
| Corresponding_transcript | F17E5.1a.1 | ||||||||
| F17E5.1b.1 | |||||||||
| Other_sequence | X92564 | ||||||||
| X92565 | |||||||||
| Acan_isotig06820 | |||||||||
| Dviv_isotig11158 | |||||||||
| FC543064.1 | |||||||||
| FC547263.1 | |||||||||
| Tcir_isotig09562 | |||||||||
| Dviv_isotig11159 | |||||||||
| TIC00168_1 | |||||||||
| Dviv_isotig11156 | |||||||||
| TS02682 | |||||||||
| BU087473.1 | |||||||||
| AJ616401.1 | |||||||||
| Oden_isotig24681 | |||||||||
| EY460218.1 | |||||||||
| EY461716.1 | |||||||||
| Tcir_isotig10318 | |||||||||
| DI01295 | |||||||||
| SS02470 | |||||||||
| Name_isotig01556 | |||||||||
| Acan_isotig09943 | |||||||||
| DIC00836_1 | |||||||||
| FG350565.1 | |||||||||
| FC545257.1 | |||||||||
| CRC04270_1 | |||||||||
| HC07029 | |||||||||
| ACC05519_1 | |||||||||
| OOC01599_1 | |||||||||
| FC547878.1 | |||||||||
| FC546237.1 | |||||||||
| HCC09594_1 | |||||||||
| Tcol_isotig16165 | |||||||||
| EX564747.1 | |||||||||
| JI169587.1 | |||||||||
| Acan_isotig06819 | |||||||||
| HCC05355_1 | |||||||||
| NAC01754_1 | |||||||||
| SSC01404_1 | |||||||||
| CR03553 | |||||||||
| EY462568.1 | |||||||||
| HC04520 | |||||||||
| EX557172.1 | |||||||||
| EX562973.1 | |||||||||
| Hbac_isotig06665 | |||||||||
| Dviv_isotig11157 | |||||||||
| CJC04586_1 | |||||||||
| TSC01603_1 | |||||||||
| EX565145.1 | |||||||||
| JI173511.1 | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013468 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030265 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044888 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000540 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076312 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (11) | |||||||||
| Drives_construct | WBCnstr00022290 | ||||||||
| WBCnstr00036300 | |||||||||
| Construct_product | WBCnstr00012382 | ||||||||
| WBCnstr00021427 | |||||||||
| WBCnstr00036300 | |||||||||
| WBCnstr00038376 | |||||||||
| WBCnstr00038378 | |||||||||
| WBCnstr00041675 | |||||||||
| Antibody | WBAntibody00000973 | ||||||||
| WBAntibody00001507 | |||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (169) | |||||||||
| Interaction (292) | |||||||||
| Map_info | Map | X | Position | 7.04058 | Error | 0.007077 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | yDp11 | |||||||
| Positive_clone | C43C10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| F17E5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Mapping_data | 2_point | 168 | |||||||
| 280 | |||||||||
| 281 | |||||||||
| Multi_point (25) | |||||||||
| Pos_neg_data | 320 | ||||||||
| 686 | |||||||||
| 687 | |||||||||
| 871 | |||||||||
| 8424 | |||||||||
| 8431 | |||||||||
| 8443 | |||||||||
| 8451 | |||||||||
| 8457 | |||||||||
| Landmark_gene | |||||||||
| Reference (172) | |||||||||
| Method | Gene |
