WormBase Tree Display for Gene: WBGene00007058

WBGene00007058 SMap: S_parent: Sequence: F13G11
  Identity: Version: 3
    Name: CGC_name: dmd-6 Person_evidence: WBPerson1997
            WBPerson1375
      Sequence_name: F13G11.1
      Molecular_name: F13G11.1b
        F13G11.1b.1
        CE17661
        F13G11.1c
        CE44552
        F13G11.1d
        CE44560
        F13G11.1b.2
        F13G11.1c.1
        F13G11.1d.1
      Other_name: tag-193 Person_evidence: WBPerson201
        CELE_F13G11.1 Accession_evidence: NDB BX284604
      Public_name: dmd-6
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 13:09:06 WBPerson1845 Event: Created
        2 16 Jun 2006 16:28:50 WBPerson2970 Name_change: CGC_name: dmd-6
                Other_name: tag-193
        3 10 Jun 2014 12:12:12 WBPerson1983 Event: Acquires_merge: WBGene00008771
      Acquires_merge: WBGene00008771
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dmd
    Allele (127)
    Strain: WBStrain00035927
    RNASeq_FPKM (74)
    GO_annotation: 00007535
      00007536
      00007537
      00007538
      00007539
      00037192
      00037193
      00037194
      00037195
      00037196
      00037197
      00115278
      00115279
    Ortholog (23)
    Paralog: WBGene00003100 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00003114 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00012832 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00017326 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00022060 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00019521 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007929 Caenorhabditis elegans From_analysis: Panther
      WBGene00020708 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00007776 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be located in nucleus. Expressed in several structures, including neurons; pharynx; rectum; tail; and vulva. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F13G11.1b
      F13G11.1c
      F13G11.1d
    Corresponding_CDS_history: F13G11.1a:wp229
    Corresponding_transcript: F13G11.1b.1
      F13G11.1b.2
      F13G11.1c.1
      F13G11.1d.1
    Other_sequence: Dviv_isotig13382
      Oden_isotig27751
      ES743563.1
      Tcol_isotig17762
      HBC08398_1
      Dviv_isotig25506
      AY534891.1
      CJC03186_1
      CBC16217_1
    Associated_feature (29)
    Transcription_factor: WBTranscriptionFactor000986
  Experimental_info: RNAi_result: WBRNAi00013236 Inferred_automatically: RNAi_primary
      WBRNAi00030900 Inferred_automatically: RNAi_primary
      WBRNAi00044531 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9817
      Expr9820
      Expr9821
      Expr1019760
      Expr1033032
      Expr1148483
      Expr2010957
      Expr2029196
    Drives_construct: WBCnstr00014337
      WBCnstr00014340
      WBCnstr00014341
      WBCnstr00034023
    Construct_product: WBCnstr00034023
    Microarray_results (29)
    Expression_cluster (180)
    Interaction: WBInteraction000031947
      WBInteraction000416237
      WBInteraction000521469
      WBInteraction000525687
      WBInteraction000525688
      WBInteraction000525689
      WBInteraction000525690
      WBInteraction000525691
      WBInteraction000525692
      WBInteraction000525693
      WBInteraction000525694
      WBInteraction000525695
      WBInteraction000525696
      WBInteraction000525697
      WBInteraction000525698
      WBInteraction000525699
      WBInteraction000525700
      WBInteraction000525701
      WBInteraction000525702
      WBInteraction000525703
      WBInteraction000525704
      WBInteraction000525705
      WBInteraction000525706
      WBInteraction000525707
      WBInteraction000525708
      WBInteraction000525709
      WBInteraction000525710
      WBInteraction000525711
      WBInteraction000525712
      WBInteraction000525713
      WBInteraction000525714
      WBInteraction000525715
      WBInteraction000525716
      WBInteraction000525862
      WBInteraction000526180
      WBInteraction000526286
      WBInteraction000527059
      WBInteraction000527256
      WBInteraction000527534
      WBInteraction000527598
      WBInteraction000528165
      WBInteraction000528234
      WBInteraction000528371
      WBInteraction000528438
      WBInteraction000528613
      WBInteraction000528695
      WBInteraction000528734
      WBInteraction000528948
      WBInteraction000529008
      WBInteraction000529427
      WBInteraction000529937
      WBInteraction000530107
      WBInteraction000530302
      WBInteraction000530544
      WBInteraction000530704
      WBInteraction000530739
      WBInteraction000530898
      WBInteraction000531131
      WBInteraction000531306
      WBInteraction000531512
      WBInteraction000531707
      WBInteraction000531771
      WBInteraction000532180
      WBInteraction000532210
      WBInteraction000532329
      WBInteraction000532380
      WBInteraction000532790
      WBInteraction000533003
      WBInteraction000533516
      WBInteraction000533654
      WBInteraction000533764
      WBInteraction000533849
      WBInteraction000534028
  Map_info: Map: IV Position: 12.2712 Error: 0.002366
    Positive: Positive_clone: F13G11 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5531
        4393
    Pseudo_map_position
  Reference: WBPaper00051737
  Remark: tag-193 is parsed from CGC strain VC622
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene