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WormBase Tree Display for Gene: WBGene00020708

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Name Class

WBGene00020708SMapS_parentSequenceT22H9
IdentityVersion2
NameCGC_namedmd-8Person_evidenceWBPerson1375
Sequence_nameT22H9.4
Molecular_nameT22H9.4
T22H9.4.1
CE33328
Other_nameCELE_T22H9.4Accession_evidenceNDBBX284605
Public_namedmd-8
DB_infoDatabaseAceViewgene5A812
WormQTLgeneWBGene00020708
WormFluxgeneWBGene00020708
NDBlocus_tagCELE_T22H9.4
PanthergeneCAEEL|WormBase=WBGene00020708|UniProtKB=Q9TXN8
familyPTHR12322
NCBIgene188771
RefSeqproteinNM_070775.5
TREEFAMTREEFAM_IDTF318689
TrEMBLUniProtAccQ9TXN8
UniProt_GCRPUniProtAccQ9TXN8
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Oct 2010 14:05:22WBPerson2970Name_changeCGC_namedmd-8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdmd
Allele (41)
StrainWBStrain00031933
RNASeq_FPKM (74)
GO_annotation (14)
Ortholog (31)
ParalogWBGene00003100Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003114Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007058Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007929Caenorhabditis elegansFrom_analysisPanther
WBGene00012832Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017326Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019521Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00022060Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007776Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II and sex differentiation. Predicted to be located in nucleus. Expressed in amphid neurons. Is an ortholog of human DMRTB1 (DMRT like family B with proline rich C-terminal 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST22H9.4
Corresponding_CDS_historyT22H9.4:wp93
Corresponding_transcriptT22H9.4.1
Other_sequenceAcan_isotig12320
JI216242.1
BXC04029_1
Acan_isotig22775
Associated_feature (11)
Transcription_factorWBTranscriptionFactor001144
Experimental_infoRNAi_resultWBRNAi00053880Inferred_automaticallyRNAi_primary
Expr_patternExpr2074
Expr1019376
Expr1157427
Expr2010959
Expr2029198
Drives_constructWBCnstr00024944
Construct_productWBCnstr00024944
Microarray_results (18)
Expression_cluster (101)
Interaction (118)
Map_infoMapVPosition-20.003
PositivePositive_cloneT22H9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064942
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene