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WormBase Tree Display for Gene: WBGene00077762

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Name Class

WBGene00077762SMapS_parentSequenceY57G11C
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (19)
RNASeq_FPKM (74)
OrthologCSP28.g5833Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2324Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2326Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2327Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g2328Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g696Caenorhabditis beceiFrom_analysisWormBase-Compara
chrIV_pilon.g12519Caenorhabditis elegansFrom_analysisWormBase-Compara
Paralog (224)
Structured_descriptionAutomated_descriptionEnriched in germline precursor cell; head mesodermal cell; and intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including multi-walled carbon nanotube; Alovudine; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY57G11C.499
Corresponding_transcriptY57G11C.499.1
Experimental_infoExpr_patternExpr1023305
Expr1161130
Expr2008072
Expr2026311
Microarray_results (13)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:germline-precursors_embryo_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00045774:clk-1_upregulated
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00049377:MWCNT_downregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053302:alovudine_72h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00055226:adr-1(tm668)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056826:hmc_biased
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00061341:28C_24h_upregulated
WBPaper00061479:hda-1(ne4752)_upregulated
WBPaper00061479:hrde-1(tm1200)_upregulated
WBPaper00061527:fbxa-154_11499-Y44A6D.1
WBPaper00061636:atracurium_downregulated
WBPaper00061995:mter-4(syb3662syb3403)_upregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064473:ets-4(rrr16)_upregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_H
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_old
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00050407:hsp-6(RNAi)_upregulated
Map_infoPositivePositive_cloneY57G11CInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV12.4353
MethodGene