WormBase Tree Display for Gene: WBGene00045108

WBGene00045108 SMap: S_parent: Sequence: H01G02
  Identity: Version: 1
    Name: Sequence_name: H01G02.4
      Molecular_name: H01G02.4
        H01G02.4.1
        CE43640
        H01G02.4.2
        H01G02.4.3
      Other_name: CELE_H01G02.4 Accession_evidence: NDB BX284604
      Public_name: H01G02.4
    DB_info: Database: AceView gene 4M564
        WormFlux gene WBGene00045108
        NDB locus_tag CELE_H01G02.4
        NCBI gene 4927019
        RefSeq protein NM_001383209.1
        TrEMBL UniProtAcc A0T4F8
        UniProt_GCRP UniProtAcc A0T4F8
    Species: Caenorhabditis elegans
    History: Version_change: 1 01 Nov 2006 13:36:28 WBPerson4025 Event: Split_from: WBGene00010348
      Split_from: WBGene00010348
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (27)
    RNASeq_FPKM (74)
    Ortholog: chrIV_pilon.g11935 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00008949 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in NSM; germ line; and intestine based on RNA-seq; tiling array; and microarray studies. Is affected by several genes including daf-2; eat-2; and sir-2.1 based on microarray and RNA-seq studies. Is affected by eight chemicals including Tunicamycin; Rifampin; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: H01G02.4
    Corresponding_CDS_history: H01G02.4:wp201
    Corresponding_transcript (3)
  Experimental_info: RNAi_result: WBRNAi00012761 Inferred_automatically: RNAi_primary
      WBRNAi00016158 Inferred_automatically: RNAi_primary
      WBRNAi00043625 Inferred_automatically: RNAi_primary
      WBRNAi00005925 Inferred_automatically: RNAi_primary
      WBRNAi00005585 Inferred_automatically: RNAi_primary
      WBRNAi00003088 Inferred_automatically: RNAi_primary
      WBRNAi00049253 Inferred_automatically: RNAi_primary
      WBRNAi00006461 Inferred_automatically: RNAi_primary
      WBRNAi00043784 Inferred_automatically: RNAi_primary
      WBRNAi00041266 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011577
      Expr1152998
      Expr2004501
      Expr2022727
    Microarray_results (18)
    Expression_cluster: WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00044736:rising_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045521:Spermatogenic
      WBPaper00045974:NSM_enriched_totalRNA_tiling
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00053154:human-amyloid-beta_tau_regulated
      WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055226:adr-1(tm668)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055386:daf-2(e1370)_upregulated
      WBPaper00055386:eat-2(ad465)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060921:tdc-1(n3419)_downregulated
      WBPaper00061424:Diet_MYb131_upregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
      WBPaper00061527:C01G10.14-dct-9_3227
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062456:doxycycline_upregulated_CB4856_transcript
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00064509:static-magnetic-field_upregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065005:sams-3(RNAi)_upregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00066038:mip-1(how5)_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4489_group_4
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00036286:Pattern_E
      WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
      WBPaper00041960:daf-16_fasting_upregulated
      WBPaper00041960:jun-1_fasting_upregulated
      WBPaper00041960:kgb-1_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated
      WBPaper00041960:N2_fasting_upregulated_9hto12h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045673:colistin_downregulated
      WBPaper00046548:dafachronic-acid_downregulated
      [cgc6390]:herm_sex-enriched
    Interaction: WBInteraction000563598
      WBInteraction000579025
      WBInteraction000579026
  Map_info: Positive: Positive_clone: H01G02 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 5.29925
  Method: Gene