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WormBase Tree Display for Gene: WBGene00045036

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Name Class

WBGene00045036SMapS_parentSequenceK08E4
IdentityVersion1
NameSequence_nameK08E4.7
Molecular_nameK08E4.7
K08E4.7.1
CE40463
Other_nameCELE_K08E4.7Accession_evidenceNDBBX284604
Public_nameK08E4.7
DB_infoDatabaseAceViewgeneK08E4.7
WormFluxgeneWBGene00045036
NDBlocus_tagCELE_K08E4.7
PanthergeneCAEEL|WormBase=WBGene00045036|UniProtKB=Q067Y2
familyPTHR22743
NCBIgene4927039
RefSeqproteinNM_001083226.3
TREEFAMTREEFAM_IDTF315997
TrEMBLUniProtAccQ067Y2
UniProt_GCRPUniProtAccQ067Y2
SpeciesCaenorhabditis elegans
HistoryVersion_change119 Sep 2006 15:11:10WBPerson4025EventSplit_fromWBGene00010669
Split_fromWBGene00010669
StatusLive
Gene_infoBiotypeSO:0001217
Allele (22)
RNASeq_FPKM (74)
Ortholog (19)
Paralog (81)
Structured_descriptionAutomated_descriptionEnriched in NSM; germ line; hypodermis; and in male based on RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by fourteen chemicals including manganese chloride; D-glucose; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; SKP1/BTB/POZ domain superfamily; Phosphorylation site; and BTB/POZ domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK08E4.7
Corresponding_transcriptK08E4.7.1
Other_sequencePPC05774_1
PPC05872_1
PPC19571_1
Associated_featureWBsf660781
WBsf229243
Experimental_infoRNAi_resultWBRNAi00016811Inferred_automaticallyRNAi_primary
WBRNAi00050295Inferred_automaticallyRNAi_primary
Expr_patternExpr1010982
Expr1153997
Expr2004927
Expr2023149
Drives_constructWBCnstr00023320
Construct_productWBCnstr00023320
Microarray_results (17)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_downregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_downregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044743:wdr-23_neuron_upregulated
WBPaper00044760:germline_specific
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045316:prg-1_downregulated_L4
WBPaper00045521:Spermatogenic
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00048611:MnCl2_downregulated
WBPaper00048762:FOG-3_associated
WBPaper00049498:npr-1(ur89)_regulated_2
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050231:male_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050743:elli-1(sam-3)_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:hypodermis_enriched
WBPaper00050990:hypodermis_expressed
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053599:female_vs_male_downregulated
WBPaper00053599:oocyte_vs_mitosis_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055648:sperm_expressed
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056284:ints-2(RNAi)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056809:smn-1(ok355)_downregulated
WBPaper00057288:Cold_upregulated_transcript
WBPaper00059117:B.subtilis_upregulated
WBPaper00059253:sucrose_downregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060526:plp-1(ok2155)_upregulated
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061466:nath-10(icb99)_upregulated
WBPaper00061466:nath-10(icb102)_upregulated
WBPaper00061527:F42A9.7-T22B3.3
WBPaper00061902:camt-1(ok515)_regulated_BAG
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062456:doxycycline_upregulated_N2_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00062590:Aging_upregulated_neuron
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065841:66_0
WBPaper00065995:M.humicola-extract_upregulated_N2
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4489_group_16
WBPaper00025141:N2_Expressed_Genes
WBPaper00026952:class_B
WBPaper00031184:acrylamide_upregulated
WBPaper00035873:dpy-10_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_E
WBPaper00037113:Diazinon_16C_regulated
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00038304:octr-1_regulated
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00041174:genotypic
WBPaper00041174:genotypic_prime
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042236:flcn-1(ok975)_upregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00048989:N2_allantoin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00050650:mBmkTX_downregulated
[cgc6390]:spermatogenesis-enriched
Map_infoPositivePositive_cloneK08E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV5.64297
MethodGene