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WormBase Tree Display for Gene: WBGene00020378

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Name Class

WBGene00020378SMapS_parentSequenceT09B4
IdentityVersion1
NameSequence_nameT09B4.4
Molecular_nameT09B4.4
T09B4.4.1
CE36196
Other_nameCELE_T09B4.4Accession_evidenceNDBBX284601
Public_nameT09B4.4
DB_infoDatabaseAceViewgene1G745
WormQTLgeneWBGene00020378
WormFluxgeneWBGene00020378
NDBlocus_tagCELE_T09B4.4
PanthergeneCAEEL|WormBase=WBGene00020378|UniProtKB=O02159
familyPTHR23050
NCBIgene188316
RefSeqproteinNM_059377.7
TREEFAMTREEFAM_IDTF351233
TrEMBLUniProtAccO02159
UniProt_GCRPUniProtAccO02159
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:03WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
AlleleWBVar02122995
WBVar01499786
WBVar01499054
WBVar02156775
WBVar00642316
WBVar00642317
WBVar00642318
WBVar01498959
WBVar01500249
RNASeq_FPKM (74)
GO_annotation00026657
Ortholog (30)
Paralog (18)
Structured_descriptionAutomated_descriptionPredicted to enable calcium ion binding activity. Is an ortholog of human CALML4 (calmodulin like 4).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_info (5)
Experimental_infoRNAi_resultWBRNAi00035384Inferred_automaticallyRNAi_primary
WBRNAi00103520Inferred_automaticallyRNAi_primary
WBRNAi00004180Inferred_automaticallyRNAi_primary
WBRNAi00052932Inferred_automaticallyRNAi_primary
WBRNAi00076666Inferred_automaticallyRNAi_primary
Expr_patternExpr1017518
Expr1038881
Expr1156534
Expr2006030
Expr2024245
Drives_constructWBCnstr00025179
Construct_productWBCnstr00025179
Microarray_results (20)
Expression_clusterWBPaper00031040:Cluster_5
WBPaper00031040:TGF-beta_adult_upregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Elbe_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_CoreEnriched
WBPaper00037950:hypodermis_embryo_enriched
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:intestine_CoreEnriched
WBPaper00037950:intestine_embryo_enriched
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_RNAseq
WBPaper00044736:oscillating_dev_expression
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00045316:prg-1_downregulated_L1
WBPaper00045316:prg-1_upregulated_L4
WBPaper00045420:fertilization_upregulated_transcript
WBPaper00046121:endoderm_unique
WBPaper00048690:hermaphrodite-Z1-Z4_enriched
WBPaper00048690:male-Z1-Z4_enriched
WBPaper00048926:miaserin_upregulated_adult-day5
WBPaper00048988:neuron_expressed
WBPaper00049334:CE_intestine_enriched
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050344:PLM-neuron_enriched
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:intestine_enriched
WBPaper00050990:intestine_expressed
WBPaper00051039:intestine_enriched
WBPaper00051352:Long-Term-Association-Memory_upregulated
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster3
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00056826:SGP_biased
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058691:sin-3(tm1276)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058948:PA14_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060526:plp-1(ok2155)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061274:hypergravity_15xg_downregulated
WBPaper00061340:Anterior_arcade_cell
WBPaper00061340:mc1
WBPaper00061340:mc2
WBPaper00061340:mc3
WBPaper00061340:Parent_of_PVP_and_rect_V
WBPaper00061340:Pharyngeal_intestinal_valve
WBPaper00061340:Pharyngeal_marginal_cell
WBPaper00061340:pm1_pm2
WBPaper00061340:pm8
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061527:C24A3.4_16071-ech-8
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:9_2
WBPaper00065993:glp-1(e2141)_upregulated
cgc4386_cluster_4_5
cgc4489_group_5
WBPaper00025032:cluster_75
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00034739:N2lessDR1350
WBPaper00036286:Pattern_C
WBPaper00040963:Q200_down
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041174:environmental
WBPaper00041174:environmental_prime
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00048989:N2_rapamycin_upregulated
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(143_min)
[cgc5767]:expression_class_SE
[cgc5767]:expression_class_SE_pi(143_min)
[cgc6390]:Cluster_A
InteractionWBInteraction000222272
WBInteraction000230714
WBInteraction000291957
WBInteraction000379997
WBInteraction000383346
WBInteraction000392658
WBInteraction000412661
WBInteraction000413783
WBInteraction000454481
WBInteraction000455182
Map_infoPositivePositive_cloneT09B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI0.856976
MethodGene