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WormBase Tree Display for Gene: WBGene00019006

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Name Class

WBGene00019006SMapS_parentSequenceF57B10
IdentityVersion2
Name (5)
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:01WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
226 Apr 2016 12:10:59WBPerson2970Name_changeCGC_namespg-20
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classspg
Allele (22)
StrainWBStrain00003325
RNASeq_FPKM (74)
GO_annotation00033229
00033230
00033231
00033232
00033233
00123967
00123968
Contained_in_operonCEOP1952
CEOP1954
CEOP1332
Ortholog (37)
Structured_descriptionAutomated_descriptionPredicted to be involved in cell division and negative regulation of BMP signaling pathway. Predicted to be located in plasma membrane. Expressed in IL2DL; IL2DR; IL2VL; IL2VR; and body wall musculature. Human ortholog(s) of this gene implicated in Troyer syndrome. Is an ortholog of human SPART (spartin).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0050886Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18514)
Molecular_infoCorresponding_CDSF57B10.9
Corresponding_transcriptF57B10.9.1
Other_sequence (24)
Associated_featureWBsf649245
WBsf664345
WBsf219605
Experimental_infoRNAi_result (5)
Expr_patternChronogram1145
Expr6238
Expr14456
Expr1026640
Expr1038207
Expr1152581
Expr2016052
Expr2034287
Drives_constructWBCnstr00003796
WBCnstr00026130
Construct_productWBCnstr00026130
Microarray_results (18)
Expression_clusterWBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:excretory-cell_larva_enriched
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044037:eat-2_downregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Gender_Neutral
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_upregulated
WBPaper00049942:HeatShock_upregulated_hsf-1(RNAi)
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_enriched
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00051039:germline_enriched
WBPaper00051558:aging_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00053664:ins-11(tm1053)_upregulated
WBPaper00053810:clk-1(qm30)_upregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:isp-1(qm150)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00053814:25C_downregulated_PY79
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055626:pry-1(mu38)_downregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056218:daf-16(mu86)_upregulated_Day7
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00059598:HeatShock_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:ADA_ADE_grandparent
WBPaper00061340:RMED
WBPaper00061527:mtr-4_1623-W03F9.10_103
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061651:AIZ_enriched
WBPaper00061651:RMD_DV_enriched
WBPaper00061651:RMF_enriched
WBPaper00061651:SIA_enriched
WBPaper00061651:SIB_enriched
WBPaper00061651:VB01_enriched
WBPaper00061651:VB02_enriched
WBPaper00061692:acivicin_upregulated
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00062146:MOG-7-degron_1h_regulated
WBPaper00062146:MOG-7-degron_2h_regulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062354:H.zoospora_6h_regulated
WBPaper00064130:Beta-Amyloid_upregulated_protein
WBPaper00064632:daf-2(e1370)_upregulated_intestine
WBPaper00064716:paraquat_upregulated
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066085:sin-3(syb2172)_upregulated
WBPaper00066085:sin-3(tm1276)_upregulated
cgc4489_group_9
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_B
WBPaper00036383:ash-2_Day8_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00040184:hcf-1up_sir-2.1up_daf-2up
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00041207:CE_dauer_up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:daf-16_fasting_upregulated
WBPaper00041960:jun-1_fasting_upregulated
WBPaper00041960:kgb-1_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042234:xpa-1_upregulated
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00045263:ProLongevity-mtROS_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_upregulated_AdultDay2
WBPaper00053688:E.faecium_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
InteractionWBInteraction000151957
WBInteraction000179899
WBInteraction000350496
WBInteraction000355127
WBInteraction000388703
WBInteraction000443460
WBInteraction000565545
WBInteraction000581082
WBInteraction000584365
Map_infoMapIPosition1.21107
PositivePositive_cloneF57B10Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00047000
WBPaper00053550
WBPaper00055090
WBPaper00063946
WBPaper00064339
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene