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WormBase Tree Display for Gene: WBGene00017921

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Name Class

WBGene00017921SMapS_parentSequenceF29B9
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (13)
StrainWBStrain00037428
RNASeq_FPKM (74)
GO_annotation00123198
00123199
Contained_in_operonCEOP4128
Ortholog (25)
Paralog (11)
Structured_descriptionAutomated_descriptionPredicted to be involved in photoreceptor cell maintenance and sensory perception. Is an ortholog of human NXNL2 (nucleoredoxin like 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF29B9.5
Corresponding_CDS_historyF29B9.5:wp239
Corresponding_transcriptF29B9.5.1
Associated_featureWBsf228219
Experimental_infoRNAi_resultWBRNAi00001452Inferred_automaticallyRNAi_primary
WBRNAi00065393Inferred_automaticallyRNAi_primary
WBRNAi00082801Inferred_automaticallyRNAi_primary
WBRNAi00031562Inferred_automaticallyRNAi_primary
WBRNAi00082802Inferred_automaticallyRNAi_primary
WBRNAi00045902Inferred_automaticallyRNAi_primary
WBRNAi00014095Inferred_automaticallyRNAi_primary
WBRNAi00065390Inferred_automaticallyRNAi_primary
Expr_patternExpr1023273
Expr1037706
Expr1149805
Expr2003135
Expr2021348
Drives_constructWBCnstr00026914
Construct_productWBCnstr00026914
Microarray_results (17)
Expression_clusterWBPaper00036375:enriched_in_PVD_OLL
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045974:NSM_enriched_DSN-treated_RNAseq
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
WBPaper00050412:cco-1(RNAi)_downregulated_N2
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00050990:seam_expressed
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00055226:ADR-2_target_N2
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055565:AVK_enriched
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_downregulated_N2
WBPaper00056165:MINA-1_interacting_mRNA
WBPaper00058955:heatshock_upregulated_CE
WBPaper00059027:neuron-synapses_depleted
WBPaper00059598:HeatShock_upregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060459:bcat-1(RNAi)_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00061340:AVG
WBPaper00061340:MC
WBPaper00061527:rab-28-jbts-14_9542
WBPaper00061651:ALA_enriched
WBPaper00061651:AVG_enriched
WBPaper00061651:I2_enriched
WBPaper00061651:I3_enriched
WBPaper00061651:I4_enriched
WBPaper00061651:MC_enriched
WBPaper00061651:MI_enriched
WBPaper00061651:PVN_enriched
WBPaper00061651:PVT_enriched
WBPaper00062103:neuron_enriched
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064005:starvation_downregulated_N2_protein
WBPaper00065120:body-muscle-transcriptome
WBPaper00065841:28_0
WBPaper00065841:58_0
WBPaper00065841:58_1
WBPaper00065841:59_0
WBPaper00065841:67_0
WBPaper00065841:119_0
WBPaper00065841:124_0
WBPaper00065841:125_0
WBPaper00065841:131_0
WBPaper00065841:138_0
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035588:alg-1(-)_upregulated
WBPaper00037147:heatshock_upregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045294:50uM_TBBP_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
InteractionWBInteraction000321027
WBInteraction000347825
WBInteraction000358919
WBInteraction000379657
WBInteraction000384936
WBInteraction000456623
Map_infoPositivePositive_cloneF29B9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV0.534254
ReferenceWBPaper00038491
WBPaper00055090
MethodGene