WormBase Tree Display for Gene: WBGene00017720

WBGene00017720 SMap: S_parent: Sequence: F22F7
  Identity: Version: 1
    Name: Sequence_name: F22F7.2
      Molecular_name: F22F7.2
        F22F7.2.1
        CE17692
      Other_name: CELE_F22F7.2 Accession_evidence: NDB BX284605
      Public_name: F22F7.2
    DB_info: Database: AceView gene 5C603AND5C607
            5C603
        WormQTL gene WBGene00017720
        WormFlux gene WBGene00017720
        NDB locus_tag CELE_F22F7.2
        Panther gene CAEEL|WormBase=WBGene00017720|UniProtKB=Q9GZF0
          family PTHR12286
        NCBI gene 184861
        RefSeq protein NM_071175.6
        TREEFAM TREEFAM_ID TF314904
        TrEMBL UniProtAcc Q9GZF0
        UniProt_GCRP UniProtAcc Q9GZF0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (103)
    Strain: WBStrain00003507
    RNASeq_FPKM (74)
    GO_annotation: 00093053
      00093054
    Contained_in_operon: CEOP5543
    Ortholog (36)
    Paralog: WBGene00017719 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021741 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in glycolipid biosynthetic process. Predicted to be located in lipid droplet. Is an ortholog of human SCCPDH (saccharopine dehydrogenase (putative)). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F22F7.2
    Corresponding_CDS_history: F22F7.2:wp106
    Corresponding_transcript: F22F7.2.1
    Associated_feature: WBsf646693
      WBsf661046
      WBsf661153
      WBsf661154
      WBsf661155
      WBsf999460
      WBsf1019262
      WBsf231470
  Experimental_info: RNAi_result: WBRNAi00031293 Inferred_automatically: RNAi_primary
      WBRNAi00080596 Inferred_automatically: RNAi_primary
      WBRNAi00013779 Inferred_automatically: RNAi_primary
      WBRNAi00045353 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5832
      Expr1013964
      Expr1037604
      Expr1149278
      Expr2002881
      Expr2021099
    Drives_construct: WBCnstr00003965
      WBCnstr00027073
    Construct_product: WBCnstr00027073
    Microarray_results (19)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044736:flat_dev_expression
      WBPaper00048923:Aging_regulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_24-cell-embryo
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050370:dpy-21(e428)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057041:spc-1(cas971)_downregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059253:stearic-acid_upregulated
      WBPaper00059253:sucrose_stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
      WBPaper00059824:rnp-6(dh1127)_regulated_OP50
      WBPaper00059824:rnp-6(dh1127)_regulated_S.aureus
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060526:plp-1(ok2155)_downregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:Intestine
      WBPaper00061341:28C_24h_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:C24A3.4_16071-ech-8
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062345:bortezomib_4h_downregulated_N2
      WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
      WBPaper00064130:Beta-Amyloid_24h_downregulated_mRNA
      WBPaper00064632:daf-2(e1370)_upregulated_intestine
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
      WBPaper00037695:WC_5-day
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00041174:environmental
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_and_environmental
      WBPaper00044091:Bpseudomallei_induced_12h
      WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
      WBPaper00048989:N2_allantoin_upregulated
    Interaction: WBInteraction000294344
      WBInteraction000308069
      WBInteraction000330775
      WBInteraction000342719
      WBInteraction000351291
  Map_info: Positive: Positive_clone: F22F7 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V -15.8034
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene