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WormBase Tree Display for Gene: WBGene00017428

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Name Class

WBGene00017428SMapS_parentSequenceF13D11
IdentityVersion1
Name (4)
DB_infoDatabaseAceViewgeneXG424
WormQTLgeneWBGene00017428
WormFluxgeneWBGene00017428
NDBlocus_tagCELE_F13D11.3
PanthergeneCAEEL|WormBase=WBGene00017428|UniProtKB=Q19388
familyPTHR45961
NCBIgene180847
RefSeqproteinNM_076574.5
TREEFAMTREEFAM_IDTF316009
TrEMBLUniProtAccQ19388
UniProt_GCRPUniProtAccQ19388
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (30)
RNASeq_FPKM (74)
GO_annotation00064602
00064603
00122821
00122822
00122823
Ortholog (36)
ParalogWBGene00007302Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00009142Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00014074Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00003043Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00006923Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00007697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009207Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00015807Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00021867Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein tyrosine/serine/threonine phosphatase activity. Predicted to be involved in dephosphorylation.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF13D11.3
Corresponding_CDS_historyF13D11.3:wp187
Corresponding_transcriptF13D11.3.1
Other_sequenceCJC17997_1
JI213662.1
Associated_featureWBsf718597
WBsf1005393
WBsf1023013
WBsf237408
Experimental_infoRNAi_resultWBRNAi00113111Inferred_automaticallyRNAi_primary
WBRNAi00112984Inferred_automaticallyRNAi_primary
WBRNAi00113214Inferred_automaticallyRNAi_primary
WBRNAi00030882Inferred_automaticallyRNAi_primary
WBRNAi00075924Inferred_automaticallyRNAi_primary
WBRNAi00013210Inferred_automaticallyRNAi_primary
WBRNAi00044497Inferred_automaticallyRNAi_primary
Expr_patternExpr1017882
Expr1148446
Expr2002505
Expr2020723
Microarray_results (19)
Expression_clusterWBPaper00032425:down_in_alg-1
WBPaper00032425:down_in_zfp-1
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00040221:DAF-12_target_ALF4
WBPaper00040221:DAF-12_target_ALF9
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044037:eat-2_upregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:flat_dev_expression
WBPaper00045314:S.aureus-induced_hlh-30(tm1978)
WBPaper00045314:S.aureus-induced_N2
WBPaper00045417:128Q-huntingtin_upreglated
WBPaper00045521:Spermatogenic
WBPaper00045571:germline-ablation_upregulated
WBPaper00045861:ash-2(tm1095)_downregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00050053:muscle_enriched_Day4
WBPaper00050053:muscle_enriched_Day12
WBPaper00050344:ASER-neuron_enriched
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_enriched
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00051257:Levamisole_upregulated
WBPaper00051265:F1_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot267)_downregulated
WBPaper00053295:lin-22(ot269)_downregulated
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055626:pry-1(mu38)_upregulated
WBPaper00055648:pharynx_expressed
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056034:pals-25(jy9)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
WBPaper00057006:DietaryRestriction_upregulated
WBPaper00057041:spc-1(cas971)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
WBPaper00060661:sensory-neuron_depleted
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060871:M.humicola-infection_48h_regulated
WBPaper00061340:ADEsh
WBPaper00061466:nath-10(icb102)_downregulated
WBPaper00061527:F16C3.2-far-7
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064532:pals-25(icb98)_upregulated
WBPaper00064716:paraquat_downregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065841:4_2
WBPaper00065841:9_0
WBPaper00065841:9_1
WBPaper00065841:24_1
WBPaper00065841:120_0
WBPaper00065975:P-body_vs_WholeAnimal_depleted
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_12
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:hlh_1_enriched
WBPaper00031532:Larva_Pan_Neuronal_Depleted
WBPaper00031832:slr-2_regulated
WBPaper00032948:StarveUp1
WBPaper00034739:TreatmentAffectedGenes
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00047070:N2_starvation_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
Interaction (115)
Map_infoPositivePositive_cloneF13D11Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX-4.28792
ReferenceWBPaper00038491
WBPaper00055090
MethodGene