Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00017420

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00017420SMapS_parentSequenceF13B9
IdentityVersion1
NameSequence_nameF13B9.2
Molecular_nameF13B9.2
F13B9.2.1
CE04379
Other_nameCELE_F13B9.2Accession_evidenceNDBBX284606
Public_nameF13B9.2
DB_infoDatabaseAceViewgeneXI905
WormQTLgeneWBGene00017420
WormFluxgeneWBGene00017420
NDBlocus_tagCELE_F13B9.2
PanthergeneCAEEL|WormBase=WBGene00017420|UniProtKB=Q19385
familyPTHR37435
NCBIgene181083
RefSeqproteinNM_076997.4
TREEFAMTREEFAM_IDTF318220
TrEMBLUniProtAccQ19385
UniProt_GCRPUniProtAccQ19385
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (27)
RNASeq_FPKM (74)
Ortholog (17)
ParalogWBGene00001068Caenorhabditis elegansFrom_analysisPanther
WBGene00008511Caenorhabditis elegansFrom_analysisPanther
WBGene00017307Caenorhabditis elegansFrom_analysisPanther
WBGene00017998Caenorhabditis elegansFrom_analysisPanther
WBGene00021326Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in hypodermis; rectal epithelial cell; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and let-60 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including methylmercury hydroxide; D-glucose; and sesamin based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF13B9.2
Corresponding_transcriptF13B9.2.1
Other_sequenceHbac_isotig06200
Associated_featureWBsf662374
WBsf1006103
Experimental_infoRNAi_resultWBRNAi00013196Inferred_automaticallyRNAi_primary
WBRNAi00030874Inferred_automaticallyRNAi_primary
WBRNAi00044486Inferred_automaticallyRNAi_primary
Expr_patternExpr1022842
Expr1037490
Expr1148435
Expr2002500
Expr2020718
Drives_constructWBCnstr00027313
Construct_productWBCnstr00027313
Microarray_results (18)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037682:sma-2_sma-4_upregulated
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:hypodermis_larva_SelectivelyEnriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00040221:DAF-12_target_ALF4
WBPaper00043945:MeHg_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00044786:emr-1(gk119)_upregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045257:bar-1(ga80)_downregulated
WBPaper00045774:clk-1_downregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00048988:daf-2(e1370)_daf-16(mu86)_upregulated_neuron
WBPaper00049018:swsn-2.2(RNAi)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
WBPaper00050344:PLM-neuron_enriched
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050843:sesamin_downregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00051404:alg-1(gk214)_downregulated
WBPaper00051404:alg-2(ok304)_downregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055049:S.gordonii_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059231:alh-6(lax105)_L4_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_downregulated
WBPaper00059421:daf-1(m40)_upregulated
WBPaper00059421:daf-3(mgDf90)_downregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060273:vrk-1(RNAi)_downregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_downregulated_L4
WBPaper00060661:sensory-neuron_enriched
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:B_F_K_Kp_U_Y
WBPaper00061340:Seam_cell
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061466:nath-10(icb99)_downregulated
WBPaper00061527:F53B1.6_3658-ZK829.3_3484
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
WBPaper00061853:tunicamycin_downregulated_N2
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062497:xpf-1(tm2842)_upregulated
WBPaper00062520:qui-1(db104)_upregulated
WBPaper00062534:fat-P-80_downregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064509:static-magnetic-field_upregulated
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064728:cpl-1(W32AY35A)_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065029:cadmium_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065984:pals-17(syb3980)_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_2
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00032948:FedUp
WBPaper00032948:MoltOssilate
WBPaper00034739:N2lessDR1350
WBPaper00035905:FBF-1_Associated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_E
WBPaper00038172:crh-1null_down_regulated
WBPaper00038172:tax-6null_down_regulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00046083:oga-1(ok1207)_OP50_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00046548:dafachronic-acid_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc6390]:Cluster_B
Interaction (91)
Map_info (2)
MethodGene