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WormBase Tree Display for Gene: WBGene00017201

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Name Class

WBGene00017201SMapS_parentSequenceF07C4
IdentityVersion2
NameCGC_namegrsp-4Person_evidenceWBPerson168
Sequence_nameF07C4.7
Molecular_nameF07C4.7
F07C4.7.1
CE09206
Other_nameCELE_F07C4.7Accession_evidenceNDBBX284605
Public_namegrsp-4
DB_infoDatabaseAceViewgene5I105
WormQTLgeneWBGene00017201
WormFluxgeneWBGene00017201
NDBlocus_tagCELE_F07C4.7
NCBIgene179146
RefSeqproteinNM_072569.5
TrEMBLUniProtAccP91207
UniProt_GCRPUniProtAccP91207
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
228 Jul 2005 14:17:26WBPerson2970Name_changeCGC_namegrsp-4
StatusLive
Gene_info (6)
Molecular_infoCorresponding_CDSF07C4.7
Corresponding_transcriptF07C4.7.1
Other_sequenceCJC03855_1
CJC17171_1
Associated_featureWBsf1000483
WBsf1019931
WBsf1019932
WBsf231996
Experimental_infoRNAi_resultWBRNAi00098175Inferred_automaticallyRNAi_primary
WBRNAi00043895Inferred_automaticallyRNAi_primary
WBRNAi00012819Inferred_automaticallyRNAi_primary
WBRNAi00030604Inferred_automaticallyRNAi_primary
Expr_pattern (4)
Drives_constructWBCnstr00027486
Construct_productWBCnstr00027486
Microarray_results (11)
Expression_clusterWBPaper00024375:Up_N2_vs_vhl-1
WBPaper00027339:daf-12(rh273)_downregulated
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:hypodermis_larva_enriched
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Spermatogenic
WBPaper00045571:germline-ablation_upregulated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00047131:daf-2(e1370)_downregulated_N2-background
WBPaper00048988:neuron_expressed
WBPaper00049368:daf-2(e1370)_downregulated
WBPaper00049545:cco-1(RNAi)_downregulated
WBPaper00049635:dop-1(vs100)_downregulated
WBPaper00049736:daf-2(e1370)_downregulated_15deg-then-25deg(12hr)
WBPaper00049942:HeatShock_upregulated_hsf-1(+)
WBPaper00049954:BPS_upregulated
WBPaper00050163:chd-3(eh4);let-418(RNAi)_downregulated_100-cell-embryo
WBPaper00050163:chd-3(eh4)_downregulated_100-cell-embryo
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050726:OsmoticStress_regulated_NoFood
WBPaper00050743:elli-1(sam-3)_downregulated
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051311:VGLN-1-interacting
WBPaper00051352:Long-Term-Association-Memory_downregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053599:female_vs_male_downregulated
WBPaper00053810:daf-2(e1370)_downregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00055060:flr-1(RNAi)_downregulated
WBPaper00055103:thoc-5(wy822)_downregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:daf-2(e1370)_downregulated
WBPaper00055827:daf-2(e1370)_downregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_20C_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056039:efa-6(tm3124)_downregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056218:daf-16(mu86)_downregulated_Day7
WBPaper00056284:ints-1(RNAi)_downregulated
WBPaper00056443:DietaryRestriction_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00057068:numr-1(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_downregulated
WBPaper00059194:klf-1(RNAi)_regulated
WBPaper00059421:daf-1(m40);daf-3(mgDf90)_upregulated
WBPaper00059421:daf-3(mgDf90)_upregulated
WBPaper00059566:wdr-23(mac32)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
WBPaper00059839:S.maltophilia_regulated
WBPaper00059895:wounding_downregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
WBPaper00060445:ikb-1(nr2027)_upregulated_L1
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060871:M.humicola-extract_1h_regulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061007:HB101_downregulated
WBPaper00061274:hypergravity_15xg_upregulated
WBPaper00061274:microgravity_downregulated
WBPaper00061405:S.aureus_downregulated_starvation
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:172183_at-176110_at
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00061952:daf-18(nr2037)_upregulated
WBPaper00061952:daf-18(yh1)_upregulated
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:daf-16(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_upregulated
WBPaper00062440:crh-1(syb385)_upregulated
WBPaper00062672:dcp-66(RNAi)_upregulated
WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
WBPaper00064122:vulva_transcriptome
WBPaper00064130:Beta-Amyloid_24h_upregulated_mRNA
WBPaper00064156:lipl-4(overexpress)_downregulated
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064539:nhr-114(gk849)_upregulated
WBPaper00064632:daf-2(e1370)_downregulated_intestine
WBPaper00064716:paraquat_downregulated
WBPaper00064727:daf-2(e1370)_downregulated
WBPaper00064769:him-17(me24)_upregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065120:body-muscle-transcriptome
WBPaper00065331:100nM-ivermectin_upregulated
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065835:Day11_vs_Day1_downregulated
WBPaper00065835:mtH2S-AP39-D0-treatment_upregulated_Day11
WBPaper00065841:0_0
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:ash-2(RNAi)_downregulated_WT
cgc4386_cluster_1_6
cgc4489_group_24
WBPaper00025099:NI_specific
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026952:class_A
WBPaper00030985:Photorhabdus_luminescens_downregulated
WBPaper00032948:StarveUp1
WBPaper00034661:AgNPs_downregulated
WBPaper00034739:N2lessDR1350
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035479:daf-16(RNAi)_upregulated
WBPaper00036286:Pattern_C
WBPaper00040184:hcf-1down_sir-2.1down_daf-2down
WBPaper00040185:nhr-23(RNAi)_downregulated
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HQ_3d_2.0mM_Down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045015:nhr-25(RNAi)_downregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045960:L1-L4-lethargus_downregulated
WBPaper00045960:L4-lethargus_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00055899:nitroguanidine_regulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_B
Interaction (28)
Map_infoMapVPosition0.819865Error0.000492
PositivePositive_cloneF07C4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene