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WormBase Tree Display for Gene: WBGene00015055

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Name Class

WBGene00015055SMapS_parentSequenceB0222
IdentityVersion2
Name (5)
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:55WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
231 Aug 2012 11:56:39WBPerson2970Name_changeCGC_namepitr-3
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpitr
Allele (50)
StrainWBStrain00001139
RNASeq_FPKM (74)
GO_annotation00058213
00058214
00058215
00058216
00058217
00058218
00121067
00121068
00121069
Ortholog (51)
ParalogWBGene00007141Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00012285Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00015054Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017312Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016739Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable inorganic phosphate transmembrane transporter activity. Predicted to be involved in phosphate ion transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in basal ganglia calcification. Is an ortholog of human SLC20A1 (solute carrier family 20 member 1) and SLC20A2 (solute carrier family 20 member 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060230Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:10947)
Molecular_infoCorresponding_CDSB0222.3
Corresponding_transcriptB0222.3.1
Other_sequence (22)
Associated_featureWBsf717247
WBsf234183
WBsf234184
Experimental_infoRNAi_resultWBRNAi00009598Inferred_automaticallyRNAi_primary
WBRNAi00038754Inferred_automaticallyRNAi_primary
Expr_patternChronogram1694
Expr5022
Expr1029012
Expr1036432
Expr1142965
Expr2014939
Expr2033174
Drives_constructWBCnstr00002035
WBCnstr00029122
Construct_productWBCnstr00029122
Microarray_results (17)
Expression_clusterWBPaper00033070:Rhine_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:excretory-cell_larva_enriched
WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00038061:aldicarb_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
WBPaper00044260:1-methylnicotinamide_downregulated
WBPaper00044260:nicotic-acid_downregulated
WBPaper00044656:tatn-1(qd182)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00045521:Gender_Neutral
WBPaper00045861:ash-2(tm1095)_upregulated
WBPaper00045934:wrn-1(gk99)_downregulated
WBPaper00046121:endoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00049489:AMsh-glia_enriched
WBPaper00049495:starvation-refeeding_regulated
WBPaper00049498:npr-1(ur89)_regulated_8
WBPaper00049736:daf-2(e1370)_upregulated_15deg-then-25deg(12hr)
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00051265:F4_hrde-1(tm1200)_downregulated
WBPaper00051265:F4_morc-1(tm6048)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053295:lin-22(icb38)_upregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00054192:cold-shock_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00054872:egl-9(sa307)_upregulated
WBPaper00055226:ADR-2_target_adr-1(tm668)
WBPaper00055226:ADR-2_target_N2
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055386:eat-2(ad465)_downregulated
WBPaper00055482:Tunicamycin_upregulated
WBPaper00055648:male-tail_expressed
WBPaper00055827:daf-2(e1370)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00055981:fog-2(q71)_upregulated
WBPaper00056039:ptrn-1(tm5597)_upregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056169:rrf-3(pk1426)_upregulated_L2
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056446:hsb-1(cg116)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057041:unc-70(cas983)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057154:HeatShock_downregulated_mRNA
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058691:set-2(bn129)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059224:tph-1(mg280)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059895:wounding_upregulated
WBPaper00059987:Wounding_upregulated
WBPaper00060014:set-2(tm1630)_downregulated
WBPaper00060273:isp-1(qm150)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060683:hlh-11(ko1)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:HB101_upregulated
WBPaper00061007:S.aquatilis_upregulated
WBPaper00061007:X.citri_upregulated
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061203:spr-1(ok2144)_upregulated
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:mc2
WBPaper00061340:NSM_parent
WBPaper00061340:Parent_of_g1P_I3
WBPaper00061340:pm3_pm4_pm5
WBPaper00061341:28C_24h_upregulated
WBPaper00061527:C25E10.12-F17H10.2
WBPaper00061651:PHsh_enriched
WBPaper00061699:daf-18(ok480)_downregulated
WBPaper00061823:mex-3(spr9)_downregulated
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062078:NMR-HspB1_regulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062184:PA14_downregulated
WBPaper00062197:mec-8_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062606:rotenone_upregulated
WBPaper00062669:extracellular-vesicle_protein
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064306:Agaro-oligosaccharides_upregulated
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064871:hypoxia_downregulated_F1
WBPaper00064933:bcf-1(ylf1)_downregulated_transcript
WBPaper00064999:miR-229-64-65-66_upregulated
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065835:Day5_vs_Day1_downregulated
WBPaper00065841:5_0
WBPaper00065841:5_1
WBPaper00065841:30_5
WBPaper00065841:37_0
WBPaper00065841:43_0
WBPaper00065841:45_0
WBPaper00065841:79_2
WBPaper00065841:141_0
WBPaper00065975:P-body_vs_oocyte_depleted
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_2
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00029437:dcr-1_upregulated
WBPaper00030985:Erwinia_carotovora_upregulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032062:age_regulated_genes
WBPaper00034739:N2lessDR1350
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035084:L4_enriched_AIN-2_IP
WBPaper00035588:alg-1(-)_upregulated
WBPaper00036123:Atrazine_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036286:Pattern_D
WBPaper00037695:LD_DD_6-day
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040210:Chlorpyrifos_24C_regulated
WBPaper00040823:alg-1(gk214)_upregulated
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00042548:miRISC_enriched
WBPaper00044091:Bpseudomallei_induced_4h
WBPaper00044535:male_upregulated
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045673:colistin_upregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00050515:nipi-3(fr4)_upregulated
WBPaper00050538:Fasting_upregulated
WBPaper00050767:Octopamine_induced
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
Interaction (27)
Map_infoMapVPosition1.94548
PositivePositive_cloneB0222Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00032126
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene