WormBase Tree Display for Gene: WBGene00011115

WBGene00011115 SMap: S_parent: Sequence: R07E5
  Identity: Version: 1
    Name: Sequence_name: R07E5.7
      Molecular_name: R07E5.7
        R07E5.7.1
        CE00672
      Other_name: CELE_R07E5.7 Accession_evidence: NDB BX284603
      Public_name: R07E5.7
    DB_info: Database: AceView gene 3F510
        WormQTL gene WBGene00011115
        WormFlux gene WBGene00011115
        NDB locus_tag CELE_R07E5.7
        Panther gene CAEEL|WormBase=WBGene00011115|UniProtKB=Q21821
          family PTHR31792
        NCBI gene 175577
        RefSeq protein NM_065497.4
        TREEFAM TREEFAM_ID TF318666
        TrEMBL UniProtAcc Q21821
        UniProt_GCRP UniProtAcc Q21821
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (14)
    Strain: WBStrain00002150
    RNASeq_FPKM (74)
    GO_annotation: 00072997
      00072998
      00072999
      00073000
      00073001
      00105634
      00105758
      00118414
    Contained_in_operon: CEOP3188
    Ortholog (22)
    Paralog: WBGene00011116 Caenorhabditis elegans From_analysis: Panther
      WBGene00303105 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Involved in IRE1-mediated unfolded protein response. Located in plasma membrane. Expressed in neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info (4)
  Experimental_info: RNAi_result (17)
    Expr_pattern: Chronogram932
      Expr6479
      Expr9454
      Expr1023895
      Expr1034887
      Expr1155175
      Expr2005471
      Expr2023692
    Drives_construct: WBCnstr00002909
      WBCnstr00030918
    Construct_product: WBCnstr00014019
      WBCnstr00030918
    Microarray_results (22)
    Expression_cluster: WBPaper00005700:transmembrane_protein
      WBPaper00029359_1145
      WBPaper00029359_1197
      WBPaper00029359_1208
      WBPaper00029359_1225
      WBPaper00029359_1242
      WBPaper00029359_1291
      WBPaper00029359_1367
      WBPaper00029359_1483
      WBPaper00029359_1494
      WBPaper00029359_1546
      WBPaper00029359_1561
      WBPaper00029359_1692
      WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032528:L3_enriched
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:excretory-cell_larva_enriched
      WBPaper00037950:excretory-cell_larva_SelectivelyEnriched
      WBPaper00037950:GABAergic-motor-neurons_larva_SelectivelyEnriched
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045861:wdr-5(ok1417)_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051311:VGLN-1-interacting
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_downregulated_L1_SMARTseq
      WBPaper00055648:germline_expressed
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056139:soil-microbiota_downregulated
      WBPaper00058598:sin-3(tm1276)_upregulated
      WBPaper00059174:MEG-3_interacting
      WBPaper00060683:hlh-11(ko1)_downregulated
      WBPaper00061007:HB101_downregulated
      WBPaper00061203:sin-3(tm1276)_downregulated
      WBPaper00061340:Excretory_cell
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061466:nath-10(icb99)_upregulated
      WBPaper00061527:lst-4_22151-F46F11.6_12556
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062590:Aging_upregulated_neuron
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065120:body-muscle-transcriptome
      cgc4386_cluster_4_4
      WBPaper00006465:II_ethanol_late_induction
      WBPaper00025032:cluster_98
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00032165:differentially_expressed_with_age_medoid_5
      WBPaper00035905:FBF-1_Associated
      WBPaper00036123:Fluoranthene_regulated
      WBPaper00037611:RNP-8-associated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00053236:Starvation_regulated_GR1307
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(53_min)
      [cgc5767]:expression_class_ME
      [cgc6390]:Cluster_E
      [cgc6390]:mixed_oogenesis-somatic
    Interaction (17)
  Map_info: Positive: Positive_clone: R07E5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -3.17423
  Reference: WBPaper00036659
    WBPaper00038444
  Method: Gene