WormBase Tree Display for Gene: WBGene00010919

WBGene00010919 SMap: S_parent: Sequence: M117
  Identity: Version: 1
    Name: Sequence_name: M117.3
      Molecular_name: M117.3
        M117.3.1
        CE06201
      Other_name: CELE_M117.3 Accession_evidence: NDB BX284604
      Public_name: M117.3
    DB_info: Database: AceView gene 4M589
        WormQTL gene WBGene00010919
        SignaLink protein WBGene00010919
        WormFlux gene WBGene00010919
        NDB locus_tag CELE_M117.3
        Panther gene CAEEL|WormBase=WBGene00010919|UniProtKB=Q21539
          family PTHR18860
        NCBI gene 187477
        RefSeq protein NM_069835.2
        TrEMBL UniProtAcc Q21539
        UniProt_GCRP UniProtAcc Q21539
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (54)
    RNASeq_FPKM (74)
    GO_annotation: 00072030
      00072031
    Ortholog: CSP21.g172 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP38.g21956 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cang_2012_03_13_00122.g4958 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_18525.g25984 Caenorhabditis angaria From_analysis: WormBase-Compara
      chrIV_pilon.g11939 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00304616 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263870 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00263872 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286406 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301276 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00001502 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00003920 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: M117.3 can encode a protein with similarity to the C-terminal half of the 14-3-3 proteins PAR-5 and FTT-2, beginning in predicted alpha helix five and continuing through the ends of the proteins; loss of M117.3 activity via large-scale RNAi results in no obvious abnormalities. Paper_evidence: WBPaper00002793
          Curator_confirmed: WBPerson1843
          Date_last_updated: 22 Mar 2007 00:00:00
      Automated_description: Predicted to be involved in signal transduction. Predicted to be located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M117.3
    Corresponding_transcript: M117.3.1
    Associated_feature (2)
  Experimental_info: RNAi_result (60)
    Expr_pattern: Expr1013478
      Expr1154659
      Expr2005236
      Expr2023454
    Drives_construct: WBCnstr00031052
    Construct_product: WBCnstr00031052
    Microarray_results (16)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00042194:nhr-114(RNAi)_upregulated
      WBPaper00044760:germline_specific
      WBPaper00045774:clk-1_upregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00051039:germline_enriched
      WBPaper00053289:DREAM-target
      WBPaper00053664:ins-11(tm1053)_downregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00056284:ints-5(RNAi)_upregulated
      WBPaper00058598:mex-3(eu149)_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
      WBPaper00059471:EGL-43_interacting
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060445:nfki-1(cer1)_upregulated_L4
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060909:atfs-1(et18)_upregulated
      WBPaper00061340:Neuroblast_I6_M5
      WBPaper00061340:Neuroblast_IL1_IL2
      WBPaper00061340:RID
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061357:mett-10(ok2204)_upregulated_OP50
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:hrde-1(tm1200)_upregulated
      WBPaper00061527:C10C5.2-Y58A7A.3
      WBPaper00061995:mter-4(syb3662syb3403)_upregulated
      WBPaper00064539:nhr-114(gk849)_upregulated
      WBPaper00065005:sams-3(RNAi)_downregulated
      WBPaper00065005:sams-4(RNAi)_downregulated
      WBPaper00065096:Day10_vs_Day1_upregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
      WBPaper00065158:25C_vs_15C_downregulated_WholeAnimal
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030985:Enterococcus_faecalis_downregulated
      WBPaper00030985:Erwinia_carotovora_upregulated
      WBPaper00036286:Pattern_B
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00046853:AOBr_LakeStobenseeOct_upregulated
      WBPaper00048989:N2_allantoin_upregulated
    Interaction: WBInteraction000284763
  Map_info: Positive: Positive_clone: M117 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 5.30681
  Reference: WBPaper00002793
    WBPaper00055090
  Method: Gene