WormBase Tree Display for Gene: WBGene00009462

WBGene00009462 SMap: S_parent: Sequence: F36D1
  Identity: Version: 2
    Name: CGC_name: sre-22 Person_evidence: WBPerson522
      Sequence_name: F36D1.2
      Molecular_name: F36D1.2
        F36D1.2.1
        CE18663
      Other_name: CELE_F36D1.2 Accession_evidence: NDB BX284601
      Public_name: sre-22
    DB_info: Database: AceView gene 1L876
        WormQTL gene WBGene00009462
        WormFlux gene WBGene00009462
        NDB locus_tag CELE_F36D1.2
        Panther gene CAEEL|WormBase=WBGene00009462|UniProtKB=Q9XV41
          family PTHR23128
        NCBI gene 185344
        RefSeq protein NM_060496.2
        TREEFAM TREEFAM_ID TF322673
        TrEMBL UniProtAcc Q9XV41
        UniProt_GCRP UniProtAcc Q9XV41
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Jan 2005 14:50:06 WBPerson2970 Name_change: CGC_name: sre-22
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: sre
    Allele (76)
    Strain: WBStrain00003152
    RNASeq_FPKM (74)
    GO_annotation: 00102246
      00102247
      00117123
      00117124
    Ortholog (18)
    Paralog: WBGene00013957 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
      WBGene00013907 Caenorhabditis elegans From_analysis: Inparanoid_8
      WBGene00010071 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010220 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016828 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00016833 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00017371 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Expressed in URBL; URBR; and body wall musculature. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36D1.2
    Corresponding_transcript: F36D1.2.1
    Associated_feature: WBsf985250
      WBsf1010692
  Experimental_info: RNAi_result: WBRNAi00046462 Inferred_automatically: RNAi_primary
      WBRNAi00031839 Inferred_automatically: RNAi_primary
      WBRNAi00022350 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5967
      Expr14039
      Expr1018660
      Expr1150336
      Expr2034504
    Drives_construct: WBCnstr00003630
      WBCnstr00032164
    Construct_product: WBCnstr00032164
    Microarray_results (19)
    Expression_cluster: WBPaper00033065:cyc-1(RNAi)_downregulated
      WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00044316:HgCl2_20uM_upregulated
      WBPaper00044760:germline_specific
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00048988:daf-2(e1370)_downregulated_neuron
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049377:MWCNT_upregulated
      WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00054493:hpl-2(tm1489)_downregulated
      WBPaper00055103:thoc-5(wy822)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rapamycin-Rifampicin_downregulated
      WBPaper00055354:Rifampicin-Psora_downregulated
      WBPaper00056826:hmc_biased
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00059027:neuron-synapses_depleted
      WBPaper00059763:neuron_acr-2(n2420gf)_regulated
      WBPaper00060014:set-2(zr2012)_upregulated
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061527:sre-33-ZK1025.1_8337
      WBPaper00061651:PVT_enriched
      WBPaper00062103:neuron_enriched
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062590:Aging_downregulated_neuron
      WBPaper00065841:62_0
      WBPaper00065841:91_0
      WBPaper00065841:138_0
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00041609:hpl-1_hpl-2_upregulated
    Interaction (14)
  Map_info: Map: I Position: 7.93465 Error: 0.001489
    Positive: Positive_clone: F36D1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene