WormBase Tree Display for Gene: WBGene00010071
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| WBGene00010071 | SMap | S_parent | Sequence | F54F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sre-45 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F54F11.3 | ||||||||
| Molecular_name | F54F11.3 | ||||||||
| F54F11.3.1 | |||||||||
| CE32897 | |||||||||
| Other_name | CELE_F54F11.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | sre-45 | ||||||||
| DB_info | Database | AceView | gene | 2N815 | |||||
| WormQTL | gene | WBGene00010071 | |||||||
| WormFlux | gene | WBGene00010071 | |||||||
| NDB | locus_tag | CELE_F54F11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010071|UniProtKB=O02275 | |||||||
| family | PTHR47631 | ||||||||
| NCBI | gene | 186258 | |||||||
| RefSeq | protein | NM_064442.3 | |||||||
| SwissProt | UniProtAcc | O02275 | |||||||
| TREEFAM | TREEFAM_ID | TF316213 | |||||||
| UniProt_GCRP | UniProtAcc | O02275 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jan 2005 14:50:06 | WBPerson2970 | Name_change | CGC_name | sre-45 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sre | ||||||||
| Allele (163) | |||||||||
| Strain | WBStrain00002077 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00026916 | ||||||||
| 00026917 | |||||||||
| 00117563 | |||||||||
| 00117564 | |||||||||
| Ortholog (18) | |||||||||
| Paralog (46) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54F11.3 | |||||||
| Corresponding_CDS_history | F54F11.3:wp57 | ||||||||
| F54F11.3:wp92 | |||||||||
| Corresponding_transcript | F54F11.3.1 | ||||||||
| Other_sequence | JI467896.1 | ||||||||
| JI473527.1 | |||||||||
| MJ04812 | |||||||||
| ASC04132_1 | |||||||||
| JI211757.1 | |||||||||
| Associated_feature | WBsf658369 | ||||||||
| WBsf658370 | |||||||||
| WBsf990446 | |||||||||
| WBsf990447 | |||||||||
| WBsf1013654 | |||||||||
| WBsf222373 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048359 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015645 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032809 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr6181 | ||||||||
| Expr1022929 | |||||||||
| Expr1152154 | |||||||||
| Expr2016297 | |||||||||
| Expr2034523 | |||||||||
| Drives_construct | WBCnstr00002860 | ||||||||
| WBCnstr00031690 | |||||||||
| Construct_product | WBCnstr00031690 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (47) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | II | Position | 17.8562 | Error | 0.078972 | |||
| Positive | Positive_clone | F54F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
