WormBase Tree Display for Gene: WBGene00009454

WBGene00009454 SMap: S_parent: Sequence: F36A2
  Identity: Version: 1
    Name: Sequence_name: F36A2.7
      Molecular_name (3)
      Other_name: CELE_F36A2.7 Accession_evidence: NDB BX284601
      Public_name: F36A2.7
    DB_info: Database: AceView gene 1J391
        WormQTL gene WBGene00009454
        WormFlux gene WBGene00009454
        NDB locus_tag CELE_F36A2.7
        NCBI gene 172692
        RefSeq protein NM_059982.5
        TREEFAM TREEFAM_ID TF317585
        TrEMBL UniProtAcc P90860
        UniProt_GCRP UniProtAcc P90860
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (20)
    Strain: WBStrain00032083
    RNASeq_FPKM (74)
    GO_annotation: 00049272
    Ortholog (28)
    Paralog: WBGene00009042 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Expressed in several structures, including pharynx and spermatheca. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F36A2.7
    Corresponding_transcript: F36A2.7.1
    Other_sequence (56)
    Associated_feature: WBsf643558
      WBsf218219
      WBsf218220
  Experimental_info: RNAi_result: WBRNAi00025402 Inferred_automatically: RNAi_primary
      WBRNAi00025401 Inferred_automatically: RNAi_primary
      WBRNAi00081414 Inferred_automatically: RNAi_primary
      WBRNAi00000046 Inferred_automatically: RNAi_primary
      WBRNAi00046447 Inferred_automatically: RNAi_primary
      WBRNAi00106136 Inferred_automatically: RNAi_primary
      WBRNAi00095608 Inferred_automatically: RNAi_primary
      WBRNAi00031829 Inferred_automatically: RNAi_primary
      WBRNAi00106084 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13592
      Expr1010865
      Expr1034139
      Expr1150316
      Expr2003367
      Expr2021579
    Drives_construct: WBCnstr00032172
    Construct_product: WBCnstr00032172
    Microarray_results (22)
    Expression_cluster: WBPaper00005700:secreted_protein
      WBPaper00028451:Abundant_spermatogenesis_enriched
      WBPaper00032528:L3_enriched
      WBPaper00033070:Elbe_upregulated
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:hypodermis_larva_SelectivelyEnriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038213:E.coli(LF82)_72h_upregulated
      WBPaper00038289:oocyte_protein
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040965:lipid-droplet_associated_protein
      WBPaper00044128:DietaryRestriction_downregulated
      WBPaper00044426:rotenone_24h_upregulated
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044746:aging_downregulated_HeatShock
      WBPaper00045316:prg-1_upregulated_L1
      WBPaper00045316:prg-1_upregulated_L3
      WBPaper00045521:Gender_Neutral
      WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
      WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
      WBPaper00048988:neuron_expressed
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049942:HeatShock_downregulated_hsf-1(RNAi)
      WBPaper00049942:HeatShock_upregulated_hsf-1(+)
      WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050698:DEP-1_interacting
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00050990:pharynx_expressed
      WBPaper00050990:seam_expressed
      WBPaper00051245:body-wall-muscle_cytoplasm_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051555:atm-1(gk186)_regulated_protein
      WBPaper00051558:aging_regulated
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053289:DREAM-target
      WBPaper00053388:dauer_regulated_Cluster6
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056471:S.aureus-4h_downregulated_N2
      WBPaper00056617:adr-1(tm668)_upregulated_embryo_protein
      WBPaper00056900:PID-3_interacting
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_upregulated
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059356:BAZ-2_SET-6_interacting
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061341:28C_48h_downregulated
      WBPaper00061377:MYRF-2_interacting
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061478:SUMO-conjugated_protein
      WBPaper00061527:F45H10.2-R53.4_21676
      WBPaper00061651:Gonadal_sheath_cell_enriched
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064055:trl-1(cas1077)_downregulated_non-starved
      WBPaper00064055:trl-1(cas1077)_downregulated_starved
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064201:SNA-3_interacting
      WBPaper00064257:UNG-1_interacting
      WBPaper00064565:dyf-1(mn335)_regulated_protein
      WBPaper00064716:paraquat_downregulated
      WBPaper00065120:body-muscle-transcriptome
      WBPaper00065149:lin-52(n771)_downregulated
      WBPaper00065373:Cisplatin_downregulated_WT
      WBPaper00025032:cluster_164
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00034739:N2moreDR1350
      WBPaper00035504:daf-2(e1370)_upregulated
      WBPaper00039835:ifg-1_upregulated
      WBPaper00040426:CYD-1_CDK-4_downregulated
      WBPaper00040426:CYE-1_CDK-2AF_downregulated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(66_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_ME
    Interaction (48)
  Map_info: Positive: Positive_clone: F36A2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 3.19086
  Reference: WBPaper00028451
    WBPaper00031800
  Method: Gene