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WormBase Tree Display for Gene: WBGene00009060

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Name Class

WBGene00009060SMapS_parentSequenceF22E12
IdentityVersion1
NameSequence_nameF22E12.3
Molecular_name (3)
Other_nameCELE_F22E12.3Accession_evidenceNDBBX284605
Public_nameF22E12.3
DB_infoDatabaseAceViewgene5K938
WormQTLgeneWBGene00009060
WormFluxgeneWBGene00009060
NDBlocus_tagCELE_F22E12.3
PanthergeneCAEEL|WormBase=WBGene00009060|UniProtKB=Q19740
familyPTHR35017
NCBIgene184849
RefSeqproteinNM_073284.5
TREEFAMTREEFAM_IDTF319529
TrEMBLUniProtAccQ19740
UniProt_GCRPUniProtAccQ19740
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (64)
RNASeq_FPKM (74)
GO_annotation00065702
Ortholog (20)
ParalogWBGene00010926Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00045481Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00044569Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016105Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00020766Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF22E12.3
Corresponding_CDS_historyF22E12.3:wp186
F22E12.3:wp235
Corresponding_transcriptF22E12.3.1
Associated_featureWBsf652994
WBsf668622
WBsf668675
WBsf669311
WBsf669312
WBsf1001116
WBsf1020310
Experimental_infoRNAi_resultWBRNAi00031279Inferred_automaticallyRNAi_primary
WBRNAi00013757Inferred_automaticallyRNAi_primary
WBRNAi00045329Inferred_automaticallyRNAi_primary
WBRNAi00108141Inferred_automaticallyRNAi_primary
WBRNAi00031278Inferred_automaticallyRNAi_primary
WBRNAi00045328Inferred_automaticallyRNAi_primary
WBRNAi00107627Inferred_automaticallyRNAi_primary
WBRNAi00108142Inferred_automaticallyRNAi_primary
WBRNAi00108140Inferred_automaticallyRNAi_primary
WBRNAi00013758Inferred_automaticallyRNAi_primary
Expr_patternExpr1029055
Expr1149252
Expr2002864
Expr2021081
Drives_constructWBCnstr00032491
Construct_productWBCnstr00032491
Microarray_results (19)
Expression_clusterWBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00045417:128Q-huntingtin_downreglated
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00047131:daf-2(e1370)_upregulated_N2-background
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050990:pharynx_enriched
WBPaper00050990:pharynx_expressed
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_upregulated_ClassI
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_downregulated
WBPaper00053606:N2_vs_elt-2(ca15)_downregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:hmg-4(RNAi)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056290:mdt-15(mg584)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_downregulated_N2
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
WBPaper00059471:EGL-43_interacting
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_downregulated_L4
WBPaper00059987:Wounding_downregulated
WBPaper00060014:set-2(zr2012)_downregulated
WBPaper00060100:SiNP_downregulated_mRNA
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061340:mu_int_mu_anal
WBPaper00061340:mu_sph
WBPaper00061340:PVT
WBPaper00061527:sol-1-jnk-1_18695
WBPaper00061995:mter-4(syb3662syb3403)_downregulated
WBPaper00062118:neural-HSF-1_downregulated
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064532:pals-25(icb98)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065841:17_0
WBPaper00065841:26_2
WBPaper00065841:138_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00026980:intestine_enriched
WBPaper00031832:slr-2_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_I
WBPaper00038172:crh-1null_down_regulated
WBPaper00039866:ClassComp_daf-19_downregulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:control_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045673:colistin_upregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053550:daf-19(m86)_downregulated_3-fold-embryo
Interaction (15)
Map_infoPositivePositive_cloneF22E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV2.56246
ReferenceWBPaper00047137
MethodGene