WormBase Tree Display for Gene: WBGene00016105
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| WBGene00016105 | SMap | S_parent | Sequence | C25F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C25F6.6 | |||||||
| Molecular_name | C25F6.6 | ||||||||
| C25F6.6.1 | |||||||||
| CE52487 | |||||||||
| Other_name | CELE_C25F6.6 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C25F6.6 | ||||||||
| DB_info | Database | AceView | gene | XG66 | |||||
| WormQTL | gene | WBGene00016105 | |||||||
| WormFlux | gene | WBGene00016105 | |||||||
| NDB | locus_tag | CELE_C25F6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016105|UniProtKB=Q18162 | |||||||
| family | PTHR35017 | ||||||||
| NCBI | gene | 182897 | |||||||
| RefSeq | protein | NM_001361809.2 | |||||||
| TREEFAM | TREEFAM_ID | TF319529 | |||||||
| TrEMBL | UniProtAcc | Q18162 | |||||||
| UniProt_GCRP | UniProtAcc | Q18162 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| Strain | WBStrain00032919 | ||||||||
| WBStrain00037159 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00009060 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00010926 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00045481 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00020766 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00044569 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in MSaapaapa; MSpapaapa; g1P; and nerve ring neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-12; and rrf-3 based on microarray and RNA-seq studies. Is affected by seven chemicals including D-glucose; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C25F6.6 | |||||||
| Corresponding_CDS_history | C25F6.6:wp263 | ||||||||
| Corresponding_transcript | C25F6.6.1 | ||||||||
| Associated_feature | WBsf653979 | ||||||||
| WBsf1005266 | |||||||||
| WBsf1005267 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011169 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041196 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027239 | ||||||||
| Expr1145227 | |||||||||
| Expr2001085 | |||||||||
| Expr2019306 | |||||||||
| Drives_construct | WBCnstr00028322 | ||||||||
| Construct_product | WBCnstr00028322 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (69) | |||||||||
| Interaction | WBInteraction000182788 | ||||||||
| WBInteraction000228478 | |||||||||
| Map_info | Positive | Positive_clone | C25F6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -5.3052 | |||||||
| Method | Gene |
