WormBase Tree Display for Gene: WBGene00007970

WBGene00007970 SMap: S_parent: Sequence: C36A4
  Identity: Version: 1
    Name: Sequence_name: C36A4.10
      Molecular_name: C36A4.10
        C36A4.10.1
        CE33979
        C36A4.10.2
        C36A4.10.3
        C36A4.10.4
        C36A4.10.5
        C36A4.10.6
        C36A4.10.7
      Other_name: CELE_C36A4.10 Accession_evidence: NDB BX284603
      Public_name: C36A4.10
    DB_info: Database: AceView gene 3E918
        WormQTL gene WBGene00007970
        WormFlux gene WBGene00007970
        NDB locus_tag CELE_C36A4.10
        NCBI gene 175494
        RefSeq protein NM_001384058.1
        TrEMBL UniProtAcc Q18497
        UniProt_GCRP UniProtAcc Q18497
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (42)
    RNASeq_FPKM (74)
    Structured_description: Automated_description: Enriched in several structures, including AVK; GLR; MSpppaaa; head mesodermal cell; and intestine based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including eat-2; sir-2.1; and clk-1 based on microarray and RNA-seq studies. Is affected by hydrogen sulfide and Sirolimus based on microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C36A4.10
    Corresponding_CDS_history: C36A4.10:wp100
    Corresponding_transcript (7)
    Associated_feature: WBsf650936
  Experimental_info: RNAi_result: WBRNAi00042013 Inferred_automatically: RNAi_primary
      WBRNAi00029593 Inferred_automatically: RNAi_primary
      WBRNAi00011672 Inferred_automatically: RNAi_primary
      WBRNAi00006340 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1033459
      Expr1146020
      Expr2001460
      Expr2019683
    Microarray_results (15)
    Expression_cluster: WBPaper00024505:pharyngeal_enriched
      WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00032528:L3_depleted
      WBPaper00038168:lin-15B(n744)_upregulated
      WBPaper00038438:D.coniospora_12hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00040285:H2S_24hr_upregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045390:ubc-9(RNAi)_downregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:daf-2(e1370)_vs_daf-2(e1370);mir-34(gk437)_regulated_dauer_25C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053368:F.oxysporum_regulated
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00058598:mex-1(or286)_downregulated
      WBPaper00059754:C.neoformans_H99_upregulated
      WBPaper00059754:E.faecalis_OG1RF_upregulated
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00060921:tdc-1(n3419)_downregulated
      WBPaper00060921:tph-1(mg280)_downregulated
      WBPaper00061340:GLR
      WBPaper00061340:hmc_and_homolog
      WBPaper00061527:fbxa-35-Y39A3A.3
      WBPaper00062103:neuron_enriched
      WBPaper00062585:hlh-26(ok1453)_downregulated_E.faecium
      WBPaper00064509:static-magnetic-field_upregulated
      WBPaper00065392:Lb.gasseri_downregulated
      WBPaper00065392:Lb.reuteri_downregulated
      WBPaper00065392:P.pentosaceus_downregulated
      cgc4489_group_19
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00036286:Pattern_F
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-exposed_48h
      WBPaper00041960:N2_fasting_upregulated_anytime
      WBPaper00047070:xpa-1_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:eat-2(ad465)_upregulated_in-DMSO
      WBPaper00048989:N2_rapamycin_downregulated
      [cgc6390]:Cluster_A
    Interaction: WBInteraction000547447
  Map_info: Positive: Positive_clone: C36A4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -4.24943
  Method: Gene