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WormBase Tree Display for Gene: WBGene00007955

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Name Class

WBGene00007955SMapS_parentSequenceC35C5
IdentityVersion2
NameCGC_nameselt-1.1Person_evidenceWBPerson5890
Sequence_nameC35C5.3
Molecular_nameC35C5.3a
C35C5.3a.1
CE43224
C35C5.3b
CE43266
C35C5.3b.1
Other_nameCELE_C35C5.3Accession_evidenceNDBBX284606
Public_nameselt-1.1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Nov 2016 11:06:21WBPerson2970Name_changeCGC_nameselt-1.1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classselt
Allele (27)
RNASeq_FPKM (74)
GO_annotation00100346
00100347
00100348
00100349
00100350
00100351
00100352
00100353
00100354
00100355
Ortholog (36)
ParalogWBGene00009238Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable thioredoxin-disulfide reductase (NADP) activity. Predicted to be involved in cell redox homeostasis. Predicted to be located in endoplasmic reticulum membrane. Expressed in several structures, including P5.paaa; amphid neurons; body wall musculature; interfacial epithelial cell; and pharyngeal cell. Is an ortholog of human SELENOT (selenoprotein T).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC35C5.3a
C35C5.3b
Corresponding_CDS_historyC35C5.3a:wp196
C35C5.3b:wp196
Corresponding_transcriptC35C5.3a.1
C35C5.3b.1
Other_sequence (43)
Associated_featureWBsf654426
WBsf982240
WBsf1007032
WBsf1023890
WBsf237974
WBsf237975
WBsf237976
WBsf237977
Experimental_infoRNAi_resultWBRNAi00041965Inferred_automaticallyRNAi_primary
WBRNAi00011652Inferred_automaticallyRNAi_primary
Expr_patternExpr13334
Expr1025113
Expr1033453
Expr1145979
Expr2015739
Expr2033972
Drives_constructWBCnstr00033353
WBCnstr00039205
WBCnstr00039206
Construct_productWBCnstr00033353
WBCnstr00039206
Microarray_results (27)
Expression_clusterWBPaper00032031:DConiospora_downregulated_cDNA_12h
WBPaper00032528:L3_enriched
WBPaper00032976:dosage_compensated_genes
WBPaper00033065:cyc-1(RNAi)_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038289:oocyte_protein
WBPaper00040209:B.thuringiensis_upregulated_MY15
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
WBPaper00045521:Oogenic
WBPaper00045974:NSM_enriched_totalRNA_RNAseq
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_downregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00050015:ifg-1(RNAi)_downregulated
WBPaper00050094:glp-1(gf)_upregulated
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:upregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:pharynx_expressed
WBPaper00051245:epidermis_cytoplasm_expressed
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
WBPaper00053321:PGCs_depleted_NuGen
WBPaper00053388:dauer_regulated_Cluster5
WBPaper00053599:female_vs_male_upregulated
WBPaper00053599:mitosis_vs_meiosis_downregulated
WBPaper00053599:oocyte_vs_mitosis_downregulated
WBPaper00053615:SMO-1_target
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057288:Cold_downregulated_transcript
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058948:PA14_downregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059356:BAZ-2_SET-6_interacting
WBPaper00059471:EGL-43_interacting
WBPaper00060661:sensory-neuron_enriched
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00061340:Parent_of_PVP_and_rect_V
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061478:SUMO-conjugated_protein
WBPaper00061527:F13E6.1_2090-C35C5.3_1843
WBPaper00061527:uggt-1_21889-tag-320_20312
WBPaper00061651:Distal_tip_cell_enriched
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00062590:Aging_downregulated_hypodermis
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064055:trl-1(cas1077)_downregulated_starved
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064315:mes-3(bn199)_upregulated_EGCs
WBPaper00064315:mes-3(bn199)_upregulated_PGCs
WBPaper00064315:mes-4(bn73)_upregulated_EGCs
WBPaper00064315:mes-4(bn73)_upregulated_PGCs
WBPaper00064315:mrg-1(qa6200)_upregulated_PGCs
WBPaper00064716:paraquat_downregulated
WBPaper00065120:body-muscle-transcriptome
WBPaper00065158:25C_vs_15C_upregulated_AFD
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065993:glp-1(e2141)_upregulated
cgc4386_cluster_6_2
WBPaper00025032:cluster_169
WBPaper00025141:N2_Expressed_Genes
WBPaper00030985:Serratia_marcesens_upregulated
WBPaper00034757:up_by_oxidative_stress
WBPaper00035560:ahr-1_downregulated
WBPaper00037695:CC_3-day
WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041960:N2_fasting_upregulated_9hto12h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00045263:nuo-6(qm200)_upregulated
WBPaper00048624:hlh-25(ok1710)_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
[cgc5767]:expression_class_E
[cgc5767]:expression_class_E_pi(23_min)
[cgc5767]:expression_class_M
[cgc5767]:expression_class_ME
Interaction (7)
Map_infoMapXPosition4.35569
PositivePositive_cloneC35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00051003
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene