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WormBase Tree Display for Gene: WBGene00007792

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Name Class

WBGene00007792SMapS_parentSequenceC28D4
IdentityVersion1
NameSequence_nameC28D4.4
Molecular_nameC28D4.4
C28D4.4.1
CE25787
Other_nameCELE_C28D4.4Accession_evidenceNDBBX284604
Public_nameC28D4.4
DB_infoDatabaseAceViewgene4K508
WormQTLgeneWBGene00007792
WormFluxgeneWBGene00007792
NDBlocus_tagCELE_C28D4.4
PanthergeneCAEEL|WormBase=WBGene00007792|UniProtKB=O02226
familyPTHR21471
NCBIgene182981
RefSeqproteinNM_069334.6
TREEFAMTREEFAM_IDTF316369
TrEMBLUniProtAccO02226
UniProt_GCRPUniProtAccO02226
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (28)
RNASeq_FPKM (74)
Ortholog (37)
Paralog (24)
Structured_descriptionAutomated_descriptionEnriched in germ line and in male based on RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on proteomic; microarray; RNA-seq; and tiling array studies. Is affected by twenty-one chemicals including Ethanol; methylmercuric chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Acyl-CoA N-acyltransferase; Protein of unknown function (DUF1248); and Domain of unknown function DUF1248.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC28D4.4
Corresponding_CDS_historyC28D4.4:wp20
Corresponding_transcriptC28D4.4.1
Associated_featureWBsf230614
Experimental_infoRNAi_resultWBRNAi00041411Inferred_automaticallyRNAi_primary
WBRNAi00041410Inferred_automaticallyRNAi_primary
Expr_patternExpr1013339
Expr1145441
Expr2019420
Drives_constructWBCnstr00033478
Construct_productWBCnstr00033478
Microarray_results (13)
Expression_clusterWBPaper00027022:cnb-1(jh103)_downregulated
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00041954:ethanol_upregulated
WBPaper00042194:nhr-114(RNAi)_upregulated
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00044037:eat-2_regulated_nhr-62_dependent
WBPaper00044316:CH3HgCl_7.5uM_upregulated
WBPaper00044736:rising_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Spermatogenic
WBPaper00045774:clk-1_upregulated
WBPaper00046805:csr-1(RNAi)_upregulated_Set1
WBPaper00046805:P-granule-RNAi_upregulated_Set1
WBPaper00049377:MWCNT_upregulated
WBPaper00049545:jmjd-3.1(+)_downregulated
WBPaper00049920:Glucose-Diet_upregulated_N2
WBPaper00049942:hsf-1(RNAi)_downregulated
WBPaper00050231:male_enriched
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053318:Aging_downregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_downregulated_mRNA
WBPaper00053599:female_vs_male_downregulated
WBPaper00053657:JU2519_M.humicola-infection_24hr
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055386:daf-2(e1370)_upregulated
WBPaper00055386:eat-2(ad465)_upregulated
WBPaper00055482:pmt-2(RNAi)_upregulated
WBPaper00055482:Tunicamycin_downregulated
WBPaper00055648:sperm_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056034:pals-22(jy3)_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056167:Cry5B_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:flcn-1(ok975)_downregulated
WBPaper00057068:numr-1(RNAi)_upregulated_Cadmium
WBPaper00059117:B.subtilis_upregulated
WBPaper00059426:Ag-nanoparticles_upregulated
WBPaper00059605:mut-16(pk710)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059739:hira-1(gk835598)_upregulated_L4
WBPaper00059987:Wounding_upregulated
WBPaper00060445:nfki-1(cer1)_ikb-1(nr2027)_upregulated_L4
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061341:28C_24h_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:C01G10.14-dct-9_3227
WBPaper00061853:osm-3(dh441)_downregulated
WBPaper00061853:osm-3(dh441)_downregulated_tunicamycin
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062456:doxycycline_upregulated_CB4856_transcript
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064494:postdauer_downregulated_WholeAnimal
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
WBPaper00064502:spe-44(fx110)_downregulated
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064716:paraquat_downregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_25C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_upregulated_Day10_25C
WBPaper00065288:mdt-15(tm2182)_upregulated
WBPaper00065841:96_0
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00066038:mip-1(how5)_upregulated
WBPaper00066085:hda-3(ok1991)_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:ash-2(RNAi)_downregulated_WT
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035873:osm-8_regulated
WBPaper00035891:zip-2(RNAi)_downregulated
WBPaper00036286:Pattern_E
WBPaper00038172:aak-2overexpression_up_regulated
WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_old
WBPaper00040963:TA300_up
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041906:I-3690_vs_OP50_3d
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00042258:DA1877_upregulated_GravidAdult
WBPaper00045263:0.1mM-paraquat_downregulated
WBPaper00045263:isp-1(qm150)_downregulated
WBPaper00045263:nuo-6(qm200)_downregulated
WBPaper00045263:ProLongevity-mtROS_downregulated
WBPaper00045673:colistin_downregulated
WBPaper00045960:L4-lethargus_upregulated
WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
WBPaper00048989:N2_rapamycin_upregulated
WBPaper00051387:Triclosan_downregulated
Interaction (265)
Map_infoPositivePositive_cloneC28D4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV4.39697
MethodGene