WormBase Tree Display for Gene: WBGene00007413

WBGene00007413 SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 2
    Name: CGC_name: pro-2 Paper_evidence: WBPaper00028280
          Person_evidence: WBPerson275
      Sequence_name: C07E3.2
      Molecular_name: C07E3.2
        C07E3.2.1
        CE47947
      Other_name: CELE_C07E3.2 Accession_evidence: NDB BX284602
      Public_name: pro-2
    DB_info: Database: AceView gene 2K630
        WormQTL gene WBGene00007413
        WormFlux gene WBGene00007413
        NDB locus_tag CELE_C07E3.2
        Panther gene CAEEL|WormBase=WBGene00007413|UniProtKB=O17580
          family PTHR12687
        NCBI gene 174598
        RefSeq protein NM_063823.6
        SwissProt UniProtAcc O17580
        TREEFAM TREEFAM_ID TF314829
        UniProt_GCRP UniProtAcc O17580
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 03 Oct 2006 13:25:52 WBPerson2970 Name_change: CGC_name: pro-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pro
    Allele (129)
    Strain: WBStrain00007711
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP2692
    Ortholog (32)
    Structured_description (2)
  Molecular_info: Corresponding_CDS: C07E3.2
    Corresponding_transcript: C07E3.2.1
    Other_sequence (79)
    Associated_feature: WBsf666037
      WBsf989318
      WBsf223780
      WBsf223781
      WBsf223782
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr1010517
      Expr1033192
      Expr1144078
      Expr2015104
      Expr2033342
    Drives_construct: WBCnstr00033757
    Construct_product: WBCnstr00033757
    Microarray_results (15)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_upregulated_cDNA_24h
      WBPaper00032097:CGH-1-associated-mRNA
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00042477:RSR-2_complex
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045571:germline-ablation_downregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_downregulated
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_downregulated
      WBPaper00049920:Glucose-Diet_downregulated_hyl-2(tm2031)
      WBPaper00050412:cco-1(RNAi)_downregulated_N2
      WBPaper00050686:glp-1(e2141)_downregulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:body-muscle_expressed
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:body-wall-muscle_nucleus_expressed
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051245:epidermis_nucleus_expressed
      WBPaper00051245:intestine_cytoplasm_expressed
      WBPaper00051245:intestine_nucleus_expressed
      WBPaper00051245:nucleus_specific
      WBPaper00051245:pharyngeal-muscle_cytoplasm_expressed
      WBPaper00051558:aging_regulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster1
      WBPaper00053599:oocyte_vs_mitosis_upregulated
      WBPaper00053810:daf-2(e1370)_downregulated
      WBPaper00053810:isp-1(qm150)_downregulated
      WBPaper00053810:nuo-6(qm200)_downregulated
      WBPaper00055648:germline_expressed
      WBPaper00055969:electromagnetic-field_downregulated
      WBPaper00056034:pals-22(jy3)_downregulated
      WBPaper00056034:pals-25(jy9)_downregulated
      WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
      WBPaper00056443:sek-1(km4)_downregulated
      WBPaper00056826:SGP_biased
      WBPaper00057288:iff-1(RNAi)_downregulated_transcript
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00059328:mrps-5(RNAi)_upregulated_protein
      WBPaper00060014:set-2(tm1630)_upregulated
      WBPaper00060811:L1_vs_adult_downregulated_neural
      WBPaper00061340:M_cell
      WBPaper00061340:Neuroblast_I6_M5
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061439:unc-30(ok613)_downregulated
      WBPaper00061527:ZK792.5-T26G10.1
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00062590:Aging_upregulated_hypodermis
      WBPaper00064005:starvation_upregulated_N2_mRNA
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065158:25C_vs_15C_downregulated_AFD
      WBPaper00065945:global-rpoa-2(-)_upregulated_transcript
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025032:cluster_180
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_H
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041606:CE_S.marcescens_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_3h
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:intrinsic
    Interaction (263)
  Map_info: Map: II Position: 2.42251 Error: 0.00635
    Positive: Positive_clone: C07E3 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5697
        5698
        5699
      Pos_neg_data: 10762
  Reference: WBPaper00028280
    WBPaper00033795
    WBPaper00038491
    WBPaper00039470
    WBPaper00039496
    WBPaper00044530
    WBPaper00055090
    WBPaper00065308
  Method: Gene